Analysis of interatomic Contacts of Structural Units in PDB entry:
8TJH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8TJH entry

There are 4 chains in PDB entry 8TJH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 VAL 7PHE 65
A
 ASN 67ARG 218
B
 VAL 7PHE 65
B
 ASN 67ARG 218
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 4 helices in PDB entry 8TJH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
57 65Right-handed 310
Helix 2
AA2
A
81 85Right-handed 310
Helix 3
AA3
B
57 65Right-handed 310
Helix 4
AA4
B
79 84Right-handed alpha
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There are 2 sheets in PDB entry 8TJH. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 13 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
138 141first strand
Strand 2
A
154 165anti-parallel
Strand 3
A
170 181anti-parallel
Strand 4
A
89 97anti-parallel
Strand 5
A
102 112anti-parallel
Strand 6
A
115 125anti-parallel
Strand 7
A
12 22parallel
Strand 8
A
25 35anti-parallel
Strand 9
A
41 50anti-parallel
Strand 10
A
208 218anti-parallel
Strand 11
A
191 202anti-parallel
Strand 12
A
144 151anti-parallel
Strand 13
A
154 165anti-parallel
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There are 13 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
138 141first strand
Strand 2
B
154 165anti-parallel
Strand 3
B
170 181anti-parallel
Strand 4
B
89 97anti-parallel
Strand 5
B
102 112anti-parallel
Strand 6
B
115 125anti-parallel
Strand 7
B
12 22parallel
Strand 8
B
25 35anti-parallel
Strand 9
B
41 50anti-parallel
Strand 10
B
208 217anti-parallel
Strand 11
B
191 202anti-parallel
Strand 12
B
144 151anti-parallel
Strand 13
B
154 165anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il