Analysis of interatomic Contacts of Structural Units in PDB entry:
8TKP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8TKP entry

There are 6 chains in PDB entry 8TKP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 89LEU 813
B
 SER 15ILE 201
C
 ASP 15ALA 62
D
 SER 89LEU 813
E
 SER 15ILE 201
F
 ASP 15ALA 62
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 85 helices in PDB entry 8TKP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
89 107Right-handed alpha
Helix 2
AA2
A
108 110Right-handed 310
Helix 3
AA3
A
113 131Right-handed alpha
Helix 4
AA4
A
136 161Right-handed alpha
Helix 5
AA5
A
162 164Right-handed 310
Helix 6
AA6
A
166 177Right-handed alpha
Helix 7
AA7
A
178 206Right-handed alpha
Helix 8
AA8
A
206 217Right-handed alpha
Helix 9
AA9
A
221 232Right-handed alpha
Helix 10
AB1
A
234 241Right-handed alpha
Helix 11
AB2
A
243 249Right-handed alpha
Helix 12
AB3
A
260 264Right-handed 310
Helix 13
AB4
A
278 308Right-handed alpha
Helix 14
AB5
A
309 312Right-handed 310
Helix 15
AB6
A
318 325Right-handed alpha
Helix 16
AB7
A
334 355Right-handed alpha
Helix 17
AB8
A
366 395Right-handed alpha
Helix 18
AB9
A
405 430Right-handed alpha
Helix 19
AC1
A
432 471Right-handed alpha
Helix 20
AC2
A
584 591Right-handed 310
Helix 21
AC3
A
594 622Right-handed alpha
Helix 22
AC4
A
622 632Right-handed alpha
Helix 23
AC5
A
633 635Right-handed 310
Helix 24
AC6
A
651 670Right-handed alpha
Helix 25
AC7
A
675 698Right-handed alpha
Helix 26
AC8
A
713 737Right-handed alpha
Helix 27
AC9
A
753 764Right-handed alpha
Helix 28
AD1
A
767 776Right-handed alpha
Helix 29
AD2
A
777 813Right-handed alpha
Helix 30
AD3
B
21 32Right-handed alpha
Helix 31
AD4
B
35 50Right-handed alpha
Helix 32
AD5
B
61 66Right-handed alpha
Helix 33
AD6
B
70 75Right-handed alpha
Helix 34
AD7
B
76 81Right-handed alpha
Helix 35
AD8
B
84 93Right-handed alpha
Helix 36
AD9
B
102 112Right-handed alpha
Helix 37
AE1
B
117 130Right-handed alpha
Helix 38
AE2
B
138 151Right-handed alpha
Helix 39
AE3
B
155 171Right-handed alpha
Helix 40
AE4
B
179 189Right-handed alpha
Helix 41
AE5
B
192 197Right-handed alpha
Helix 42
AE6
C
24 47Right-handed alpha
Helix 43
AE7
C
53 58Right-handed alpha
Helix 44
AE8
C
59 62Right-handed 310
Helix 45
AE9
D
89 89Right-handed 310
Helix 46
AF1
D
90 107Right-handed alpha
Helix 47
AF2
D
108 110Right-handed 310
Helix 48
AF3
D
113 131Right-handed alpha
Helix 49
AF4
D
137 161Right-handed alpha
Helix 50
AF5
D
162 164Right-handed 310
Helix 51
AF6
D
166 177Right-handed alpha
Helix 52
AF7
D
178 206Right-handed alpha
Helix 53
AF8
D
206 217Right-handed alpha
Helix 54
AF9
D
221 232Right-handed alpha
Helix 55
AG1
D
234 241Right-handed alpha
Helix 56
AG2
D
243 249Right-handed alpha
Helix 57
AG3
D
277 306Right-handed alpha
Helix 58
AG4
D
318 326Right-handed alpha
Helix 59
AG5
D
334 355Right-handed alpha
Helix 60
AG6
D
367 396Right-handed alpha
Helix 61
AG7
D
405 429Right-handed alpha
Helix 62
AG8
D
432 470Right-handed alpha
Helix 63
AG9
D
584 588Right-handed alpha
Helix 64
AH1
D
594 622Right-handed alpha
Helix 65
AH2
D
622 632Right-handed alpha
Helix 66
AH3
D
651 670Right-handed alpha
Helix 67
AH4
D
675 698Right-handed alpha
Helix 68
AH5
D
713 737Right-handed alpha
Helix 69
AH6
D
753 764Right-handed alpha
Helix 70
AH7
D
765 776Right-handed alpha
Helix 71
AH8
D
777 813Right-handed alpha
Helix 72
AH9
E
21 32Right-handed alpha
Helix 73
AI1
E
35 50Right-handed alpha
Helix 74
AI2
E
61 66Right-handed alpha
Helix 75
AI3
E
70 75Right-handed alpha
Helix 76
AI4
E
76 81Right-handed alpha
Helix 77
AI5
E
84 93Right-handed alpha
Helix 78
AI6
E
102 112Right-handed alpha
Helix 79
AI7
E
117 130Right-handed alpha
Helix 80
AI8
E
138 150Right-handed alpha
Helix 81
AI9
E
155 169Right-handed alpha
Helix 82
AJ1
E
179 188Right-handed alpha
Helix 83
AJ2
E
192 197Right-handed alpha
Helix 84
AJ3
F
23 47Right-handed alpha
Helix 85
AJ4
F
53 60Right-handed alpha
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There are 4 sheets in PDB entry 8TKP. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
269 270first strand
Strand 2
A
276 277anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
67 69first strand
Strand 2
B
99 101anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
18 19first strand
Strand 2
C
22 23anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
67 69first strand
Strand 2
E
99 101anti-parallel
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