Analysis of interatomic Contacts of Structural Units in PDB entry:
8TL0

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8TL0 entry

There are 14 chains in PDB entry 8TL0 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 21	SER 521
B	ILE 21	SER 521
C	ILE 21	SER 521
D	ILE 21	SER 521
E	A 1	A 3
F	A 1	A 3
G	A 1	A 3
H	A 1	A 3
I	ILE 21	PRO 516
J	A 1	A 3
K	ILE 21	TRP 299
L	ILE 21	TRP 299
M	A 1	A 3
N	A 1	A 3

There are109 helices in PDB entry 8TL0. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	36	40	Right-handed 310
Helix 2	AA2	A	56	59	Right-handed 310
Helix 3	AA3	A	63	67	Right-handed 310
Helix 4	AA4	A	70	93	Right-handed alpha
Helix 5	AA5	A	94	98	Right-handed 310
Helix 6	AA6	A	108	119	Right-handed alpha
Helix 7	AA7	A	188	199	Right-handed alpha
Helix 8	AA8	A	230	249	Right-handed alpha
Helix 9	AA9	A	262	273	Right-handed alpha
Helix 10	AB1	A	274	279	Right-handed alpha
Helix 11	AB2	A	324	336	Right-handed alpha
Helix 12	AB3	A	354	365	Right-handed alpha
Helix 13	AB4	A	396	407	Right-handed alpha
Helix 14	AB5	A	424	432	Right-handed alpha
Helix 15	AB6	A	447	463	Right-handed alpha
Helix 16	AB7	A	466	480	Right-handed alpha
Helix 17	AB8	B	36	41	Right-handed alpha
Helix 18	AB9	B	42	44	Right-handed 310
Helix 19	AC1	B	56	59	Right-handed 310
Helix 20	AC2	B	63	67	Right-handed 310
Helix 21	AC3	B	70	93	Right-handed alpha
Helix 22	AC4	B	94	98	Right-handed 310
Helix 23	AC5	B	108	120	Right-handed alpha
Helix 24	AC6	B	166	170	Right-handed 310
Helix 25	AC7	B	188	199	Right-handed alpha
Helix 26	AC8	B	230	249	Right-handed alpha
Helix 27	AC9	B	262	272	Right-handed alpha
Helix 28	AD1	B	274	279	Right-handed alpha
Helix 29	AD2	B	324	336	Right-handed alpha
Helix 30	AD3	B	341	345	Right-handed 310
Helix 31	AD4	B	354	365	Right-handed alpha
Helix 32	AD5	B	396	407	Right-handed alpha
Helix 33	AD6	B	424	432	Right-handed alpha
Helix 34	AD7	B	447	463	Right-handed alpha
Helix 35	AD8	B	466	481	Right-handed alpha
Helix 36	AD9	B	507	511	Right-handed 310
Helix 37	AE1	C	36	44	Right-handed 310
Helix 38	AE2	C	56	59	Right-handed 310
Helix 39	AE3	C	63	67	Right-handed 310
Helix 40	AE4	C	70	93	Right-handed alpha
Helix 41	AE5	C	94	98	Right-handed 310
Helix 42	AE6	C	108	120	Right-handed alpha
Helix 43	AE7	C	188	199	Right-handed alpha
Helix 44	AE8	C	230	249	Right-handed alpha
Helix 45	AE9	C	262	273	Right-handed alpha
Helix 46	AF1	C	274	279	Right-handed alpha
Helix 47	AF2	C	324	334	Right-handed alpha
Helix 48	AF3	C	354	365	Right-handed alpha
Helix 49	AF4	C	396	407	Right-handed alpha
Helix 50	AF5	C	424	432	Right-handed alpha
Helix 51	AF6	C	447	463	Right-handed alpha
Helix 52	AF7	C	466	480	Right-handed alpha
Helix 53	AF8	D	36	41	Right-handed alpha
Helix 54	AF9	D	42	44	Right-handed 310
Helix 55	AG1	D	56	59	Right-handed 310
Helix 56	AG2	D	63	67	Right-handed 310
Helix 57	AG3	D	70	93	Right-handed alpha
Helix 58	AG4	D	95	99	Right-handed 310
Helix 59	AG5	D	108	120	Right-handed alpha
Helix 60	AG6	D	166	170	Right-handed 310
Helix 61	AG7	D	188	199	Right-handed alpha
Helix 62	AG8	D	230	249	Right-handed alpha
Helix 63	AG9	D	262	273	Right-handed alpha
Helix 64	AH1	D	274	279	Right-handed alpha
Helix 65	AH2	D	324	336	Right-handed alpha
Helix 66	AH3	D	354	365	Right-handed alpha
Helix 67	AH4	D	396	407	Right-handed alpha
Helix 68	AH5	D	424	432	Right-handed alpha
Helix 69	AH6	D	447	462	Right-handed alpha
Helix 70	AH7	D	466	481	Right-handed alpha
Helix 71	AH8	I	36	41	Right-handed alpha
Helix 72	AH9	I	42	44	Right-handed 310
Helix 73	AI1	I	56	59	Right-handed 310
Helix 74	AI2	I	63	67	Right-handed 310
Helix 75	AI3	I	70	93	Right-handed alpha
Helix 76	AI4	I	94	97	Right-handed 310
Helix 77	AI5	I	108	120	Right-handed alpha
Helix 78	AI6	I	188	200	Right-handed alpha
Helix 79	AI7	I	230	249	Right-handed alpha
Helix 80	AI8	I	262	273	Right-handed alpha
Helix 81	AI9	I	274	279	Right-handed alpha
Helix 82	AJ1	I	324	335	Right-handed alpha
Helix 83	AJ2	I	338	345	Right-handed alpha
Helix 84	AJ3	I	354	365	Right-handed alpha
Helix 85	AJ4	I	395	407	Right-handed alpha
Helix 86	AJ5	I	425	431	Right-handed alpha
Helix 87	AJ6	I	450	462	Right-handed alpha
Helix 88	AJ7	I	466	481	Right-handed alpha
Helix 89	AJ8	K	36	44	Right-handed 310
Helix 90	AJ9	K	56	59	Right-handed 310
Helix 91	AK1	K	63	67	Right-handed 310
Helix 92	AK2	K	70	93	Right-handed alpha
Helix 93	AK3	K	94	98	Right-handed 310
Helix 94	AK4	K	108	120	Right-handed alpha
Helix 95	AK5	K	188	199	Right-handed alpha
Helix 96	AK6	K	230	243	Right-handed alpha
Helix 97	AK7	K	244	249	Right-handed alpha
Helix 98	AK8	K	262	273	Right-handed alpha
Helix 99	AK9	K	274	279	Right-handed alpha
Helix 100	AL1	L	36	44	Right-handed 310
Helix 101	AL2	L	55	59	Right-handed 310
Helix 102	AL3	L	63	67	Right-handed 310
Helix 103	AL4	L	70	93	Right-handed alpha
Helix 104	AL5	L	108	120	Right-handed alpha
Helix 105	AL6	L	188	199	Right-handed alpha
Helix 106	AL7	L	230	243	Right-handed alpha
Helix 107	AL8	L	244	249	Right-handed alpha
Helix 108	AL9	L	262	273	Right-handed alpha
Helix 109	AM1	L	274	279	Right-handed alpha

There are 27 sheets in PDB entry 8TL0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	50	54	first strand
Strand 2	A	22	26	parallel
Strand 3	A	100	104	parallel
Strand 4	A	125	131	parallel
Strand 5	A	134	140	anti-parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	161	163	first strand
Strand 2	A	204	211	anti-parallel
Strand 3	A	175	182	parallel
Strand 4	A	252	260	parallel
Strand 5	A	281	282	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	285	287	first strand
Strand 2	A	290	292	anti-parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	346	350	first strand
Strand 2	A	307	312	parallel
Strand 3	A	369	376	parallel
Strand 4	A	380	384	anti-parallel
Strand 5	A	391	395	anti-parallel

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There are 6 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	346	350	first strand
Strand 2	A	307	312	parallel
Strand 3	A	369	376	parallel
Strand 4	A	416	421	parallel
Strand 5	A	437	441	parallel
Strand 6	A	489	491	anti-parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	50	54	first strand
Strand 2	B	22	26	parallel
Strand 3	B	100	104	parallel
Strand 4	B	125	130	parallel
Strand 5	B	136	140	anti-parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	161	163	first strand
Strand 2	B	207	211	anti-parallel
Strand 3	B	175	182	parallel
Strand 4	B	252	260	parallel
Strand 5	B	281	282	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	285	287	first strand
Strand 2	B	290	292	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	346	350	first strand
Strand 2	B	307	312	parallel
Strand 3	B	369	376	parallel
Strand 4	B	380	384	anti-parallel
Strand 5	B	391	395	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	346	350	first strand
Strand 2	B	307	312	parallel
Strand 3	B	369	376	parallel
Strand 4	B	416	421	parallel
Strand 5	B	437	441	parallel
Strand 6	B	489	492	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	50	54	first strand
Strand 2	C	22	26	parallel
Strand 3	C	100	104	parallel
Strand 4	C	124	130	parallel
Strand 5	C	136	140	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	161	163	first strand
Strand 2	C	204	211	anti-parallel
Strand 3	C	176	182	parallel
Strand 4	C	255	260	parallel
Strand 5	C	281	287	parallel
Strand 6	C	290	296	anti-parallel

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There are 6 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	346	350	first strand
Strand 2	C	307	312	parallel
Strand 3	C	369	374	parallel
Strand 4	C	416	421	parallel
Strand 5	C	437	441	parallel
Strand 6	C	489	492	anti-parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	380	384	first strand
Strand 2	C	391	395	anti-parallel

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There are 5 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	50	54	first strand
Strand 2	D	22	27	parallel
Strand 3	D	100	105	parallel
Strand 4	D	125	130	parallel
Strand 5	D	136	140	anti-parallel

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There are 5 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	161	163	first strand
Strand 2	D	204	211	anti-parallel
Strand 3	D	176	182	parallel
Strand 4	D	255	260	parallel
Strand 5	D	281	282	parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	285	287	first strand
Strand 2	D	290	292	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	346	350	first strand
Strand 2	D	307	312	parallel
Strand 3	D	369	376	parallel
Strand 4	D	380	384	anti-parallel
Strand 5	D	391	395	anti-parallel

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There are 6 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	346	350	first strand
Strand 2	D	307	312	parallel
Strand 3	D	369	376	parallel
Strand 4	D	416	421	parallel
Strand 5	D	437	441	parallel
Strand 6	D	489	491	anti-parallel

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There are 5 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	50	54	first strand
Strand 2	I	22	28	parallel
Strand 3	I	100	106	parallel
Strand 4	I	124	130	parallel
Strand 5	I	136	140	anti-parallel

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There are 5 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	204	211	first strand
Strand 2	I	176	182	parallel
Strand 3	I	255	260	parallel
Strand 4	I	281	287	parallel
Strand 5	I	290	296	anti-parallel

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There are 6 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	346	350	first strand
Strand 2	I	307	312	parallel
Strand 3	I	369	373	parallel
Strand 4	I	416	420	parallel
Strand 5	I	437	441	parallel
Strand 6	I	489	492	anti-parallel

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There are 2 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	382	384	first strand
Strand 2	I	391	393	anti-parallel

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There are 5 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	50	54	first strand
Strand 2	K	22	26	parallel
Strand 3	K	100	104	parallel
Strand 4	K	124	130	parallel
Strand 5	K	136	140	anti-parallel

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There are 6 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	161	163	first strand
Strand 2	K	204	211	anti-parallel
Strand 3	K	176	182	parallel
Strand 4	K	255	260	parallel
Strand 5	K	281	287	parallel
Strand 6	K	290	297	anti-parallel

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There are 5 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	50	51	first strand
Strand 2	L	22	26	parallel
Strand 3	L	100	104	parallel
Strand 4	L	124	130	parallel
Strand 5	L	136	140	anti-parallel

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There are 6 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	161	163	first strand
Strand 2	L	204	211	anti-parallel
Strand 3	L	175	182	parallel
Strand 4	L	252	260	parallel
Strand 5	L	281	287	parallel
Strand 6	L	290	297	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8TL0

Analysis of interatomic Contacts of Structural Units in PDB entry:
8TL0