Analysis of interatomic Contacts of Structural Units in PDB entry:
8TO2

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8TO2 entry

There are 29 chains in PDB entry 8TO2 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 2	VAL 692
B	GLY 10	PRO 178
C	MET 1	ALA 67
D	SER 2	SER 161
E	MET 1	SER 161
F	SER 2	SER 161
G	MET 1	SER 161
H	SER 2	SER 161
I	MET 1	SER 161
J	SER 2	SER 161
K	MET 1	SER 161
L	SER 2	SER 161
M	MET 1	SER 161
N	SER 2	SER 161
O	MET 1	SER 161
P	GLN 193	ARG 249
c	MET 1	ALA 67
d	SER 2	SER 161
e	MET 1	SER 161
f	SER 2	SER 161
g	MET 1	SER 161
h	SER 2	SER 161
i	MET 1	SER 161
j	SER 2	SER 161
k	MET 1	SER 161
l	SER 2	SER 161
m	MET 1	SER 161
o	MET 1	VAL 169
p	PRO 83	LYS 118

There are257 helices in PDB entry 8TO2. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	19	30	Right-handed alpha
Helix 2	AA2	A	36	63	Right-handed alpha
Helix 3	AA3	A	63	75	Right-handed alpha
Helix 4	AA4	A	80	84	Right-handed 310
Helix 5	AA5	A	141	145	Right-handed alpha
Helix 6	AA6	A	145	170	Right-handed alpha
Helix 7	AA7	A	172	180	Right-handed alpha
Helix 8	AA8	A	181	187	Right-handed alpha
Helix 9	AA9	A	188	190	Right-handed 310
Helix 10	AB1	A	191	209	Right-handed alpha
Helix 11	AB2	A	215	232	Right-handed alpha
Helix 12	AB3	A	254	261	Right-handed alpha
Helix 13	AB4	A	274	291	Right-handed alpha
Helix 14	AB5	A	293	299	Right-handed alpha
Helix 15	AB6	A	302	311	Right-handed alpha
Helix 16	AB7	A	315	326	Right-handed alpha
Helix 17	AB8	A	326	334	Right-handed alpha
Helix 18	AB9	A	338	352	Right-handed alpha
Helix 19	AC1	A	357	383	Right-handed alpha
Helix 20	AC2	A	383	390	Right-handed alpha
Helix 21	AC3	A	410	419	Right-handed alpha
Helix 22	AC4	A	421	425	Right-handed 310
Helix 23	AC5	A	429	438	Right-handed alpha
Helix 24	AC6	A	448	452	Right-handed 310
Helix 25	AC7	A	489	493	Right-handed 310
Helix 26	AC8	A	497	501	Right-handed 310
Helix 27	AC9	A	505	509	Right-handed 310
Helix 28	AD1	A	534	552	Right-handed alpha
Helix 29	AD2	A	561	570	Right-handed alpha
Helix 30	AD3	A	574	585	Right-handed alpha
Helix 31	AD4	A	585	593	Right-handed alpha
Helix 32	AD5	A	597	611	Right-handed alpha
Helix 33	AD6	A	616	630	Right-handed alpha
Helix 34	AD7	A	631	641	Right-handed alpha
Helix 35	AD8	A	642	649	Right-handed alpha
Helix 36	AD9	A	661	670	Right-handed alpha
Helix 37	AE1	B	19	31	Right-handed alpha
Helix 38	AE2	B	32	47	Right-handed alpha
Helix 39	AE3	B	55	60	Right-handed 310
Helix 40	AE4	B	61	74	Right-handed alpha
Helix 41	AE5	B	75	88	Right-handed alpha
Helix 42	AE6	B	92	100	Right-handed alpha
Helix 43	AE7	B	102	119	Right-handed alpha
Helix 44	AE8	B	132	145	Right-handed alpha
Helix 45	AE9	B	146	160	Right-handed alpha
Helix 46	AF1	C	21	25	Right-handed alpha
Helix 47	AF2	C	33	46	Right-handed alpha
Helix 48	AF3	D	3	14	Right-handed alpha
Helix 49	AF4	D	19	46	Right-handed alpha
Helix 50	AF5	D	46	62	Right-handed alpha
Helix 51	AF6	D	74	99	Right-handed alpha
Helix 52	AF7	D	101	109	Right-handed alpha
Helix 53	AF8	D	111	120	Right-handed alpha
Helix 54	AF9	D	122	139	Right-handed alpha
Helix 55	AG1	D	142	160	Right-handed alpha
Helix 56	AG2	E	3	15	Right-handed alpha
Helix 57	AG3	E	20	46	Right-handed alpha
Helix 58	AG4	E	47	60	Right-handed alpha
Helix 59	AG5	E	74	99	Right-handed alpha
Helix 60	AG6	E	101	107	Right-handed alpha
Helix 61	AG7	E	111	120	Right-handed alpha
Helix 62	AG8	E	122	142	Right-handed alpha
Helix 63	AG9	E	143	161	Right-handed alpha
Helix 64	AH1	F	3	14	Right-handed alpha
Helix 65	AH2	F	19	46	Right-handed alpha
Helix 66	AH3	F	46	62	Right-handed alpha
Helix 67	AH4	F	75	97	Right-handed alpha
Helix 68	AH5	F	101	108	Right-handed alpha
Helix 69	AH6	F	111	120	Right-handed alpha
Helix 70	AH7	F	122	141	Right-handed alpha
Helix 71	AH8	F	142	160	Right-handed alpha
Helix 72	AH9	G	3	15	Right-handed alpha
Helix 73	AI1	G	20	34	Right-handed alpha
Helix 74	AI2	G	35	47	Right-handed alpha
Helix 75	AI3	G	47	60	Right-handed alpha
Helix 76	AI4	G	74	98	Right-handed alpha
Helix 77	AI5	G	101	108	Right-handed alpha
Helix 78	AI6	G	111	120	Right-handed alpha
Helix 79	AI7	G	124	142	Right-handed alpha
Helix 80	AI8	G	142	161	Right-handed alpha
Helix 81	AI9	H	3	14	Right-handed alpha
Helix 82	AJ1	H	19	32	Right-handed alpha
Helix 83	AJ2	H	32	46	Right-handed alpha
Helix 84	AJ3	H	46	62	Right-handed alpha
Helix 85	AJ4	H	74	99	Right-handed alpha
Helix 86	AJ5	H	101	109	Right-handed alpha
Helix 87	AJ6	H	111	120	Right-handed alpha
Helix 88	AJ7	H	122	140	Right-handed alpha
Helix 89	AJ8	H	142	159	Right-handed alpha
Helix 90	AJ9	I	3	16	Right-handed alpha
Helix 91	AK1	I	20	33	Right-handed alpha
Helix 92	AK2	I	33	58	Right-handed alpha
Helix 93	AK3	I	74	99	Right-handed alpha
Helix 94	AK4	I	101	108	Right-handed alpha
Helix 95	AK5	I	111	120	Right-handed alpha
Helix 96	AK6	I	123	142	Right-handed alpha
Helix 97	AK7	I	143	161	Right-handed alpha
Helix 98	AK8	J	3	14	Right-handed alpha
Helix 99	AK9	J	19	46	Right-handed alpha
Helix 100	AL1	J	46	62	Right-handed alpha
Helix 101	AL2	J	63	67	Right-handed 310
Helix 102	AL3	J	73	99	Right-handed alpha
Helix 103	AL4	J	101	109	Right-handed alpha
Helix 104	AL5	J	111	119	Right-handed alpha
Helix 105	AL6	J	122	139	Right-handed alpha
Helix 106	AL7	J	142	160	Right-handed alpha
Helix 107	AL8	K	3	14	Right-handed alpha
Helix 108	AL9	K	20	60	Right-handed alpha
Helix 109	AM1	K	74	99	Right-handed alpha
Helix 110	AM2	K	101	108	Right-handed alpha
Helix 111	AM3	K	108	120	Right-handed alpha
Helix 112	AM4	K	122	142	Right-handed alpha
Helix 113	AM5	K	142	161	Right-handed alpha
Helix 114	AM6	L	3	14	Right-handed alpha
Helix 115	AM7	L	19	32	Right-handed alpha
Helix 116	AM8	L	33	46	Right-handed alpha
Helix 117	AM9	L	46	62	Right-handed alpha
Helix 118	AN1	L	63	67	Right-handed 310
Helix 119	AN2	L	74	99	Right-handed alpha
Helix 120	AN3	L	101	109	Right-handed alpha
Helix 121	AN4	L	111	120	Right-handed alpha
Helix 122	AN5	L	122	140	Right-handed alpha
Helix 123	AN6	L	142	160	Right-handed alpha
Helix 124	AN7	M	3	16	Right-handed alpha
Helix 125	AN8	M	20	47	Right-handed alpha
Helix 126	AN9	M	47	60	Right-handed alpha
Helix 127	AO1	M	74	99	Right-handed alpha
Helix 128	AO2	M	101	108	Right-handed alpha
Helix 129	AO3	M	111	120	Right-handed alpha
Helix 130	AO4	M	122	142	Right-handed alpha
Helix 131	AO5	M	144	159	Right-handed alpha
Helix 132	AO6	N	3	14	Right-handed alpha
Helix 133	AO7	N	19	32	Right-handed alpha
Helix 134	AO8	N	32	46	Right-handed alpha
Helix 135	AO9	N	46	62	Right-handed alpha
Helix 136	AP1	N	63	67	Right-handed 310
Helix 137	AP2	N	74	99	Right-handed alpha
Helix 138	AP3	N	101	109	Right-handed alpha
Helix 139	AP4	N	111	120	Right-handed alpha
Helix 140	AP5	N	122	140	Right-handed alpha
Helix 141	AP6	N	142	161	Right-handed alpha
Helix 142	AP7	O	3	15	Right-handed alpha
Helix 143	AP8	O	20	47	Right-handed alpha
Helix 144	AP9	O	47	60	Right-handed alpha
Helix 145	AQ1	O	74	99	Right-handed alpha
Helix 146	AQ2	O	101	108	Right-handed alpha
Helix 147	AQ3	O	111	120	Right-handed alpha
Helix 148	AQ4	O	122	160	Right-handed alpha
Helix 149	AQ5	P	195	202	Right-handed alpha
Helix 150	AQ6	P	205	209	Right-handed 310
Helix 151	AQ7	P	214	217	Right-handed 310
Helix 152	AQ8	P	218	226	Right-handed alpha
Helix 153	AQ9	P	236	240	Right-handed 310
Helix 154	AR1	P	241	246	Right-handed alpha
Helix 155	AR2	c	14	19	Right-handed alpha
Helix 156	AR3	c	33	46	Right-handed alpha
Helix 157	AR4	d	3	14	Right-handed alpha
Helix 158	AR5	d	19	32	Right-handed alpha
Helix 159	AR6	d	32	46	Right-handed alpha
Helix 160	AR7	d	46	62	Right-handed alpha
Helix 161	AR8	d	62	67	Right-handed alpha
Helix 162	AR9	d	74	99	Right-handed alpha
Helix 163	AS1	d	101	109	Right-handed alpha
Helix 164	AS2	d	111	119	Right-handed alpha
Helix 165	AS3	d	122	140	Right-handed alpha
Helix 166	AS4	d	142	161	Right-handed alpha
Helix 167	AS5	e	3	16	Right-handed alpha
Helix 168	AS6	e	20	33	Right-handed alpha
Helix 169	AS7	e	33	47	Right-handed alpha
Helix 170	AS8	e	47	60	Right-handed alpha
Helix 171	AS9	e	74	99	Right-handed alpha
Helix 172	AT1	e	101	108	Right-handed alpha
Helix 173	AT2	e	111	120	Right-handed alpha
Helix 174	AT3	e	122	142	Right-handed alpha
Helix 175	AT4	e	142	161	Right-handed alpha
Helix 176	AT5	f	3	14	Right-handed alpha
Helix 177	AT6	f	19	32	Right-handed alpha
Helix 178	AT7	f	32	46	Right-handed alpha
Helix 179	AT8	f	46	62	Right-handed alpha
Helix 180	AT9	f	62	67	Right-handed alpha
Helix 181	AU1	f	74	99	Right-handed alpha
Helix 182	AU2	f	101	109	Right-handed alpha
Helix 183	AU3	f	111	120	Right-handed alpha
Helix 184	AU4	f	122	140	Right-handed alpha
Helix 185	AU5	f	142	160	Right-handed alpha
Helix 186	AU6	g	3	15	Right-handed alpha
Helix 187	AU7	g	20	47	Right-handed alpha
Helix 188	AU8	g	47	60	Right-handed alpha
Helix 189	AU9	g	74	99	Right-handed alpha
Helix 190	AV1	g	101	108	Right-handed alpha
Helix 191	AV2	g	111	120	Right-handed alpha
Helix 192	AV3	g	122	142	Right-handed alpha
Helix 193	AV4	g	143	161	Right-handed alpha
Helix 194	AV5	h	3	15	Right-handed alpha
Helix 195	AV6	h	19	46	Right-handed alpha
Helix 196	AV7	h	46	62	Right-handed alpha
Helix 197	AV8	h	63	67	Right-handed 310
Helix 198	AV9	h	74	99	Right-handed alpha
Helix 199	AW1	h	101	108	Right-handed alpha
Helix 200	AW2	h	111	120	Right-handed alpha
Helix 201	AW3	h	122	141	Right-handed alpha
Helix 202	AW4	h	142	159	Right-handed alpha
Helix 203	AW5	i	3	15	Right-handed alpha
Helix 204	AW6	i	20	47	Right-handed alpha
Helix 205	AW7	i	47	60	Right-handed alpha
Helix 206	AW8	i	74	99	Right-handed alpha
Helix 207	AW9	i	101	108	Right-handed alpha
Helix 208	AX1	i	111	120	Right-handed alpha
Helix 209	AX2	i	122	142	Right-handed alpha
Helix 210	AX3	i	142	161	Right-handed alpha
Helix 211	AX4	j	3	14	Right-handed alpha
Helix 212	AX5	j	19	46	Right-handed alpha
Helix 213	AX6	j	46	62	Right-handed alpha
Helix 214	AX7	j	63	67	Right-handed 310
Helix 215	AX8	j	74	99	Right-handed alpha
Helix 216	AX9	j	101	109	Right-handed alpha
Helix 217	AY1	j	111	120	Right-handed alpha
Helix 218	AY2	j	122	139	Right-handed alpha
Helix 219	AY3	j	142	161	Right-handed alpha
Helix 220	AY4	k	3	14	Right-handed alpha
Helix 221	AY5	k	20	47	Right-handed alpha
Helix 222	AY6	k	47	60	Right-handed alpha
Helix 223	AY7	k	63	67	Right-handed 310
Helix 224	AY8	k	74	99	Right-handed alpha
Helix 225	AY9	k	101	108	Right-handed alpha
Helix 226	AZ1	k	111	120	Right-handed alpha
Helix 227	AZ2	k	122	142	Right-handed alpha
Helix 228	AZ3	k	142	161	Right-handed alpha
Helix 229	AZ4	l	3	14	Right-handed alpha
Helix 230	AZ5	l	19	32	Right-handed alpha
Helix 231	AZ6	l	33	46	Right-handed alpha
Helix 232	AZ7	l	46	62	Right-handed alpha
Helix 233	AZ8	l	63	66	Right-handed 310
Helix 234	AZ9	l	74	99	Right-handed alpha
Helix 235	BA1	l	101	109	Right-handed alpha
Helix 236	BA2	l	111	120	Right-handed alpha
Helix 237	BA3	l	122	140	Right-handed alpha
Helix 238	BA4	l	142	160	Right-handed alpha
Helix 239	BA5	m	3	15	Right-handed alpha
Helix 240	BA6	m	20	47	Right-handed alpha
Helix 241	BA7	m	47	60	Right-handed alpha
Helix 242	BA8	m	74	99	Right-handed alpha
Helix 243	BA9	m	101	108	Right-handed alpha
Helix 244	BB1	m	111	120	Right-handed alpha
Helix 245	BB2	m	122	142	Right-handed alpha
Helix 246	BB3	m	142	161	Right-handed alpha
Helix 247	BB4	o	3	15	Right-handed alpha
Helix 248	BB5	o	20	63	Right-handed alpha
Helix 249	BB6	o	64	68	Right-handed 310
Helix 250	BB7	o	74	100	Right-handed alpha
Helix 251	BB8	o	102	109	Right-handed alpha
Helix 252	BB9	o	112	121	Right-handed alpha
Helix 253	BC1	o	123	145	Right-handed alpha
Helix 254	BC2	o	153	165	Right-handed alpha
Helix 255	BC3	p	83	87	Right-handed 310
Helix 256	BC4	p	104	106	Right-handed 310
Helix 257	BC5	p	107	116	Right-handed alpha

There are 6 sheets in PDB entry 8TO2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	76	77	first strand
Strand 2	A	139	140	parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	239	241	first strand
Strand 2	A	251	253	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	485	486	first strand
Strand 2	A	659	660	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	26	32	first strand
Strand 2	C	3	9	anti-parallel
Strand 3	C	49	52	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	26	32	first strand
Strand 2	C	3	9	anti-parallel
Strand 3	C	55	57	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	c	26	32	first strand
Strand 2	c	3	9	anti-parallel
Strand 3	c	49	57	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8TO2

Analysis of interatomic Contacts of Structural Units in PDB entry:
8TO2