Analysis of interatomic Contacts of Structural Units in PDB entry:
8TOH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8TOH entry

There is 1 chain in PDB entry 8TOH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 34PRO 956
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 35 helices in PDB entry 8TOH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
36 38Right-handed 310
Helix 2
AA2
A
39 45Right-handed alpha
Helix 3
AA3
A
50 56Right-handed alpha
Helix 4
AA4
A
72 77Right-handed alpha
Helix 5
AA5
A
81 85Right-handed 310
Helix 6
AA6
A
88 96Right-handed alpha
Helix 7
AA7
A
121 125Right-handed 310
Helix 8
AA8
A
132 143Right-handed alpha
Helix 9
AA9
A
166 184Right-handed alpha
Helix 10
AB1
A
198 203Right-handed alpha
Helix 11
AB2
A
205 209Right-handed 310
Helix 12
AB3
A
210 228Right-handed alpha
Helix 13
AB4
A
239 249Right-handed alpha
Helix 14
AB5
A
260 286Right-handed alpha
Helix 15
AB6
A
287 290Right-handed 310
Helix 16
AB7
A
309 324Right-handed alpha
Helix 17
AB8
A
324 333Right-handed alpha
Helix 18
AB9
A
338 345Right-handed alpha
Helix 19
AC1
A
353 361Right-handed alpha
Helix 20
AC2
A
382 386Right-handed 310
Helix 21
AC3
A
394 405Right-handed alpha
Helix 22
AC4
A
427 448Right-handed alpha
Helix 23
AC5
A
468 470Right-handed 310
Helix 24
AC6
A
491 502Right-handed alpha
Helix 25
AC7
A
577 589Right-handed alpha
Helix 26
AC8
A
598 603Right-handed alpha
Helix 27
AC9
A
612 629Right-handed alpha
Helix 28
AD1
A
661 678Right-handed alpha
Helix 29
AD2
A
696 718Right-handed alpha
Helix 30
AD3
A
742 757Right-handed alpha
Helix 31
AD4
A
771 781Right-handed alpha
Helix 32
AD5
A
790 798Right-handed alpha
Helix 33
AD6
A
850 864Right-handed alpha
Helix 34
AD7
A
884 904Right-handed alpha
Helix 35
AD8
A
939 951Right-handed alpha
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There are 8 sheets in PDB entry 8TOH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
66 69first strand
Strand 2
A
452 457parallel
Strand 3
A
409 414parallel
Strand 4
A
366 370parallel
Strand 5
A
293 299parallel
Strand 6
A
233 238parallel
Strand 7
A
186 190parallel
Strand 8
A
146 150parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
302 304first strand
Strand 2
A
389 391anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
419 420first strand
Strand 2
A
472 473anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
594 595first strand
Strand 2
A
527 529parallel
Strand 3
A
914 915parallel
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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
634 635first strand
Strand 2
A
683 688parallel
Strand 3
A
725 731parallel
Strand 4
A
804 807parallel
Strand 5
A
868 872parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
734 737first strand
Strand 2
A
811 814parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
824 825first strand
Strand 2
A
830 831anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
928 931first strand
Strand 2
A
934 937anti-parallel
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