Analysis of interatomic Contacts of Structural Units in PDB entry:
8TQ2


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8TQ2 entry

There are 4 chains in PDB entry 8TQ2 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
C
 ALA 3ASN 84
D
 THR 1616HIS 1631
A
 MET 1LEU 359
B
 MET 1PRO 262
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 32 helices in PDB entry 8TQ2. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
C
37 44Right-handed alpha
Helix 2
AA2
C
65 84Right-handed alpha
Helix 3
AA3
D
1619 1623Right-handed 310
Helix 4
AA4
A
2 13Right-handed alpha
Helix 5
AA5
A
60 71Right-handed alpha
Helix 6
AA6
A
104 111Right-handed alpha
Helix 7
AA7
A
124 145Right-handed alpha
Helix 8
AA8
A
153 155Right-handed 310
Helix 9
AA9
A
201 206Right-handed alpha
Helix 10
AB1
A
214 230Right-handed alpha
Helix 11
AB2
A
251 260Right-handed alpha
Helix 12
AB3
A
292 300Right-handed alpha
Helix 13
AB4
A
306 316Right-handed alpha
Helix 14
AB5
A
325 332Right-handed alpha
Helix 15
AB6
B
8 13Right-handed alpha
Helix 16
AB7
B
17 25Right-handed alpha
Helix 17
AB8
B
25 30Right-handed alpha
Helix 18
AB9
B
33 55Right-handed alpha
Helix 19
AC1
B
58 70Right-handed alpha
Helix 20
AC2
B
72 75Right-handed 310
Helix 21
AC3
B
82 98Right-handed alpha
Helix 22
AC4
B
104 120Right-handed alpha
Helix 23
AC5
B
131 146Right-handed alpha
Helix 24
AC6
B
155 167Right-handed alpha
Helix 25
AC7
B
172 183Right-handed alpha
Helix 26
AC8
B
184 186Right-handed 310
Helix 27
AC9
B
187 192Right-handed alpha
Helix 28
AD1
B
193 209Right-handed alpha
Helix 29
AD2
B
213 220Right-handed alpha
Helix 30
AD3
B
225 241Right-handed alpha
Helix 31
AD4
B
242 244Right-handed 310
Helix 32
AD5
B
245 256Right-handed alpha
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There are 3 sheets in PDB entry 8TQ2. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
26 29first strand
Strand 2
A
33 38anti-parallel
Strand 3
A
49 54anti-parallel
Strand 4
A
92 98anti-parallel
Strand 5
A
81 87anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
102 103first strand
Strand 2
A
157 160anti-parallel
Strand 3
A
167 171anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 148first strand
Strand 2
A
178 179anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il