Analysis of interatomic Contacts of Structural Units in PDB entry:
8TRW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8TRW entry

There is 1 chain in PDB entry 8TRW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 75LYS 368
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 8TRW. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
77 81Right-handed 310
Helix 2
AA2
A
87 99Right-handed alpha
Helix 3
AA3
A
104 109Right-handed alpha
Helix 4
AA4
A
113 118Right-handed alpha
Helix 5
AA5
A
158 171Right-handed alpha
Helix 6
AA6
A
189 204Right-handed alpha
Helix 7
AA7
A
215 218Right-handed 310
Helix 8
AA8
A
219 228Right-handed alpha
Helix 9
AA9
A
241 243Right-handed 310
Helix 10
AB1
A
244 249Right-handed alpha
Helix 11
AB2
A
254 269Right-handed alpha
Helix 12
AB3
A
285 299Right-handed alpha
Helix 13
AB4
A
324 339Right-handed alpha
Helix 14
AB5
A
354 363Right-handed alpha
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There are 2 sheets in PDB entry 8TRW. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
127 131first strand
Strand 2
A
174 178parallel
Strand 3
A
208 212parallel
Strand 4
A
233 235parallel
Strand 5
A
273 280parallel
Strand 6
A
303 308parallel
Strand 7
A
342 345parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
136 137first strand
Strand 2
A
147 148parallel
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