Analysis of interatomic Contacts of Structural Units in PDB entry:
8TSE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8TSE entry

There is 1 chain in PDB entry 8TSE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 366TYR 774
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 8TSE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
371 375Right-handed 310
Helix 2
AA2
A
395 414Right-handed alpha
Helix 3
AA3
A
477 484Right-handed alpha
Helix 4
AA4
A
511 517Right-handed alpha
Helix 5
AA5
A
522 526Right-handed 310
Helix 6
AA6
A
528 546Right-handed alpha
Helix 7
AA7
A
547 553Right-handed alpha
Helix 8
AA8
A
565 578Right-handed alpha
Helix 9
AA9
A
608 612Right-handed 310
Helix 10
AB1
A
624 629Right-handed alpha
Helix 11
AB2
A
633 637Right-handed 310
Helix 12
AB3
A
639 644Right-handed 310
Helix 13
AB4
A
646 650Right-handed 310
Helix 14
AB5
A
653 660Right-handed alpha
Helix 15
AB6
A
677 680Right-handed 310
Helix 16
AB7
A
681 700Right-handed alpha
Helix 17
AB8
A
701 703Right-handed 310
Helix 18
AB9
A
717 734Right-handed alpha
Helix 19
AC1
A
740 746Right-handed 310
Helix 20
AC2
A
747 756Right-handed 310
Helix 21
AC3
A
757 762Right-handed alpha
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There are 2 sheets in PDB entry 8TSE. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
424 431first strand
Strand 2
A
434 441anti-parallel
Strand 3
A
447 455anti-parallel
Strand 4
A
487 491anti-parallel
Strand 5
A
466 471parallel
Strand 6
A
554 564parallel
Strand 7
A
583 587parallel
Strand 8
A
667 673parallel
Strand 9
A
705 710parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
605 606first strand
Strand 2
A
617 618anti-parallel
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