Analysis of interatomic Contacts of Structural Units in PDB entry:
8TSL

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8TSL entry

There are 12 chains in PDB entry 8TSL (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	ARG 14	SER 269
D	ARG 14	SER 269
E	LEU 9	HIS 369
F	MET 3	HIS 369
G	LEU 5	GLN 370
H	VAL 6	HIS 369
I	LEU 9	HIS 369
J	MET 3	HIS 369
K	LEU 5	GLN 370
L	VAL 6	HIS 369
A	MET 1	PRO 226
B	MET 1	PRO 226

There are112 helices in PDB entry 8TSL. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	15	36	Right-handed alpha
Helix 2	AA2	C	41	69	Right-handed alpha
Helix 3	AA3	C	73	97	Right-handed alpha
Helix 4	AA4	C	98	102	Right-handed 310
Helix 5	AA5	C	103	108	Right-handed 310
Helix 6	AA6	C	112	141	Right-handed alpha
Helix 7	AA7	C	150	176	Right-handed alpha
Helix 8	AA8	C	179	197	Right-handed alpha
Helix 9	AA9	C	207	209	Right-handed 310
Helix 10	AB1	C	210	215	Right-handed alpha
Helix 11	AB2	C	217	231	Right-handed alpha
Helix 12	AB3	C	242	263	Right-handed alpha
Helix 13	AB4	C	264	269	Right-handed alpha
Helix 14	AB5	D	15	36	Right-handed alpha
Helix 15	AB6	D	41	69	Right-handed alpha
Helix 16	AB7	D	73	97	Right-handed alpha
Helix 17	AB8	D	98	106	Right-handed 310
Helix 18	AB9	D	112	141	Right-handed alpha
Helix 19	AC1	D	150	176	Right-handed alpha
Helix 20	AC2	D	179	197	Right-handed alpha
Helix 21	AC3	D	207	209	Right-handed 310
Helix 22	AC4	D	210	215	Right-handed alpha
Helix 23	AC5	D	217	231	Right-handed alpha
Helix 24	AC6	D	242	263	Right-handed alpha
Helix 25	AC7	E	12	31	Right-handed alpha
Helix 26	AC8	E	72	84	Right-handed alpha
Helix 27	AC9	E	86	97	Right-handed alpha
Helix 28	AD1	E	97	103	Right-handed alpha
Helix 29	AD2	E	118	129	Right-handed alpha
Helix 30	AD3	E	149	177	Right-handed alpha
Helix 31	AD4	E	315	319	Right-handed 310
Helix 32	AD5	E	340	369	Right-handed alpha
Helix 33	AD6	F	6	10	Right-handed 310
Helix 34	AD7	F	11	19	Right-handed alpha
Helix 35	AD8	F	19	32	Right-handed alpha
Helix 36	AD9	F	73	84	Right-handed alpha
Helix 37	AE1	F	85	97	Right-handed alpha
Helix 38	AE2	F	97	103	Right-handed alpha
Helix 39	AE3	F	118	129	Right-handed alpha
Helix 40	AE4	F	149	176	Right-handed alpha
Helix 41	AE5	F	340	369	Right-handed alpha
Helix 42	AE6	G	5	9	Right-handed 310
Helix 43	AE7	G	10	33	Right-handed alpha
Helix 44	AE8	G	73	84	Right-handed alpha
Helix 45	AE9	G	85	97	Right-handed alpha
Helix 46	AF1	G	97	102	Right-handed alpha
Helix 47	AF2	G	118	129	Right-handed alpha
Helix 48	AF3	G	149	180	Right-handed alpha
Helix 49	AF4	G	306	319	Right-handed alpha
Helix 50	AF5	G	340	367	Right-handed alpha
Helix 51	AF6	H	11	32	Right-handed alpha
Helix 52	AF7	H	72	84	Right-handed alpha
Helix 53	AF8	H	85	97	Right-handed alpha
Helix 54	AF9	H	97	103	Right-handed alpha
Helix 55	AG1	H	118	129	Right-handed alpha
Helix 56	AG2	H	149	180	Right-handed alpha
Helix 57	AG3	H	311	317	Right-handed alpha
Helix 58	AG4	H	340	367	Right-handed alpha
Helix 59	AG5	I	12	31	Right-handed alpha
Helix 60	AG6	I	72	84	Right-handed alpha
Helix 61	AG7	I	86	97	Right-handed alpha
Helix 62	AG8	I	97	103	Right-handed alpha
Helix 63	AG9	I	118	129	Right-handed alpha
Helix 64	AH1	I	149	177	Right-handed alpha
Helix 65	AH2	I	315	319	Right-handed 310
Helix 66	AH3	I	340	369	Right-handed alpha
Helix 67	AH4	J	4	9	Right-handed alpha
Helix 68	AH5	J	10	19	Right-handed alpha
Helix 69	AH6	J	19	32	Right-handed alpha
Helix 70	AH7	J	73	84	Right-handed alpha
Helix 71	AH8	J	85	97	Right-handed alpha
Helix 72	AH9	J	97	103	Right-handed alpha
Helix 73	AI1	J	118	129	Right-handed alpha
Helix 74	AI2	J	149	176	Right-handed alpha
Helix 75	AI3	J	341	369	Right-handed alpha
Helix 76	AI4	K	5	9	Right-handed 310
Helix 77	AI5	K	10	33	Right-handed alpha
Helix 78	AI6	K	73	84	Right-handed alpha
Helix 79	AI7	K	85	97	Right-handed alpha
Helix 80	AI8	K	97	103	Right-handed alpha
Helix 81	AI9	K	118	129	Right-handed alpha
Helix 82	AJ1	K	149	180	Right-handed alpha
Helix 83	AJ2	K	306	319	Right-handed alpha
Helix 84	AJ3	K	340	368	Right-handed alpha
Helix 85	AJ4	L	11	32	Right-handed alpha
Helix 86	AJ5	L	72	84	Right-handed alpha
Helix 87	AJ6	L	85	97	Right-handed alpha
Helix 88	AJ7	L	97	103	Right-handed alpha
Helix 89	AJ8	L	118	129	Right-handed alpha
Helix 90	AJ9	L	149	181	Right-handed alpha
Helix 91	AK1	L	311	317	Right-handed alpha
Helix 92	AK2	L	340	367	Right-handed alpha
Helix 93	AK3	A	43	53	Right-handed alpha
Helix 94	AK4	A	83	95	Right-handed alpha
Helix 95	AK5	A	98	114	Right-handed alpha
Helix 96	AK6	A	116	121	Right-handed 310
Helix 97	AK7	A	122	126	Right-handed 310
Helix 98	AK8	A	127	141	Right-handed alpha
Helix 99	AK9	A	152	155	Right-handed 310
Helix 100	AL1	A	157	172	Right-handed alpha
Helix 101	AL2	A	183	191	Right-handed alpha
Helix 102	AL3	A	207	225	Right-handed alpha
Helix 103	AL4	B	43	52	Right-handed alpha
Helix 104	AL5	B	83	95	Right-handed alpha
Helix 105	AL6	B	98	114	Right-handed alpha
Helix 106	AL7	B	115	121	Right-handed 310
Helix 107	AL8	B	122	126	Right-handed 310
Helix 108	AL9	B	127	142	Right-handed alpha
Helix 109	AM1	B	152	155	Right-handed 310
Helix 110	AM2	B	157	172	Right-handed alpha
Helix 111	AM3	B	183	191	Right-handed alpha
Helix 112	AM4	B	207	225	Right-handed alpha

There are 12 sheets in PDB entry 8TSL. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	130	135	first strand
Strand 2	E	140	147	anti-parallel
Strand 3	E	38	48	anti-parallel
Strand 4	E	322	328	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	130	134	first strand
Strand 2	F	141	147	anti-parallel
Strand 3	F	38	47	anti-parallel
Strand 4	F	323	328	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	130	135	first strand
Strand 2	G	140	147	anti-parallel
Strand 3	G	38	48	anti-parallel
Strand 4	G	322	328	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	130	134	first strand
Strand 2	H	141	147	anti-parallel
Strand 3	H	38	47	anti-parallel
Strand 4	H	323	328	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	130	135	first strand
Strand 2	I	140	147	anti-parallel
Strand 3	I	38	48	anti-parallel
Strand 4	I	322	328	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	J	130	134	first strand
Strand 2	J	141	147	anti-parallel
Strand 3	J	38	47	anti-parallel
Strand 4	J	323	328	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	130	135	first strand
Strand 2	K	140	147	anti-parallel
Strand 3	K	38	48	anti-parallel
Strand 4	K	322	328	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	L	130	134	first strand
Strand 2	L	141	147	anti-parallel
Strand 3	L	38	47	anti-parallel
Strand 4	L	323	328	anti-parallel

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There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	16	28	first strand
Strand 2	A	2	13	anti-parallel
Strand 3	A	59	64	anti-parallel

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There are 6 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	68	71	first strand
Strand 2	A	146	150	parallel
Strand 3	A	176	180	parallel
Strand 4	A	34	38	parallel
Strand 5	A	193	198	parallel
Strand 6	A	201	205	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	16	27	first strand
Strand 2	B	2	13	anti-parallel
Strand 3	B	59	64	anti-parallel

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There are 6 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	68	71	first strand
Strand 2	B	146	150	parallel
Strand 3	B	176	180	parallel
Strand 4	B	34	38	parallel
Strand 5	B	193	198	parallel
Strand 6	B	201	205	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8TSL

Analysis of interatomic Contacts of Structural Units in PDB entry:
8TSL