Analysis of interatomic Contacts of Structural Units in PDB entry:
8TSS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8TSS entry

There are 2 chains in PDB entry 8TSS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 7GLY 581
B
 LEU 7GLY 581
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 8TSS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
8 21Right-handed alpha
Helix 2
AA2
A
23 48Right-handed alpha
Helix 3
AA3
A
61 66Right-handed alpha
Helix 4
AA4
A
66 109Right-handed alpha
Helix 5
AA5
A
112 119Right-handed alpha
Helix 6
AA6
A
120 164Right-handed alpha
Helix 7
AA7
A
164 209Right-handed alpha
Helix 8
AA8
A
210 212Right-handed 310
Helix 9
AA9
A
213 221Right-handed alpha
Helix 10
AB1
A
222 272Right-handed alpha
Helix 11
AB2
A
275 280Right-handed 310
Helix 12
AB3
A
281 323Right-handed alpha
Helix 13
AB4
A
381 390Right-handed alpha
Helix 14
AB5
A
411 418Right-handed alpha
Helix 15
AB6
A
432 438Right-handed alpha
Helix 16
AB7
A
446 457Right-handed alpha
Helix 17
AB8
A
459 464Right-handed alpha
Helix 18
AB9
A
468 472Right-handed 310
Helix 19
AC1
A
482 497Right-handed alpha
Helix 20
AC2
A
515 527Right-handed alpha
Helix 21
AC3
A
538 545Right-handed alpha
Helix 22
AC4
A
561 569Right-handed alpha
Helix 23
AC5
A
570 578Right-handed alpha
Helix 24
AC6
B
8 21Right-handed alpha
Helix 25
AC7
B
23 53Right-handed alpha
Helix 26
AC8
B
61 66Right-handed alpha
Helix 27
AC9
B
66 109Right-handed alpha
Helix 28
AD1
B
112 119Right-handed alpha
Helix 29
AD2
B
120 164Right-handed alpha
Helix 30
AD3
B
166 209Right-handed alpha
Helix 31
AD4
B
213 221Right-handed alpha
Helix 32
AD5
B
222 272Right-handed alpha
Helix 33
AD6
B
272 277Right-handed alpha
Helix 34
AD7
B
278 280Right-handed 310
Helix 35
AD8
B
281 323Right-handed alpha
Helix 36
AD9
B
381 390Right-handed alpha
Helix 37
AE1
B
411 418Right-handed alpha
Helix 38
AE2
B
432 438Right-handed alpha
Helix 39
AE3
B
446 457Right-handed alpha
Helix 40
AE4
B
459 464Right-handed alpha
Helix 41
AE5
B
468 472Right-handed 310
Helix 42
AE6
B
482 497Right-handed alpha
Helix 43
AE7
B
515 527Right-handed alpha
Helix 44
AE8
B
538 545Right-handed alpha
Helix 45
AE9
B
561 569Right-handed alpha
Helix 46
AF1
B
570 578Right-handed alpha
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There are 4 sheets in PDB entry 8TSS. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
359 365first strand
Strand 2
A
343 349anti-parallel
Strand 3
A
397 402anti-parallel
Strand 4
A
405 406anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
419 423first strand
Strand 2
A
501 505parallel
Strand 3
A
531 535parallel
Strand 4
A
372 375parallel
Strand 5
A
547 552parallel
Strand 6
A
555 560anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
359 365first strand
Strand 2
B
343 349anti-parallel
Strand 3
B
397 401anti-parallel
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There are 6 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
419 423first strand
Strand 2
B
501 505parallel
Strand 3
B
531 535parallel
Strand 4
B
371 375parallel
Strand 5
B
547 552parallel
Strand 6
B
555 560anti-parallel
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