Analysis of interatomic Contacts of Structural Units in PDB entry:
8TTE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8TTE entry

There are 2 chains in PDB entry 8TTE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1LYS 382
C
 SER 126PRO 140
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 8TTE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 21Right-handed alpha
Helix 2
AA2
A
25 31Right-handed alpha
Helix 3
AA3
A
36 66Right-handed alpha
Helix 4
AA4
A
67 86Right-handed alpha
Helix 5
AA5
A
90 120Right-handed alpha
Helix 6
AA6
A
121 125Right-handed 310
Helix 7
AA7
A
126 148Right-handed alpha
Helix 8
AA8
A
149 153Right-handed 310
Helix 9
AA9
A
157 177Right-handed alpha
Helix 10
AB1
A
194 199Right-handed alpha
Helix 11
AB2
A
204 233Right-handed alpha
Helix 12
AB3
A
236 264Right-handed alpha
Helix 13
AB4
A
267 289Right-handed alpha
Helix 14
AB5
A
291 308Right-handed alpha
Helix 15
AB6
A
308 322Right-handed alpha
Helix 16
AB7
A
324 354Right-handed alpha
Helix 17
AB8
A
356 382Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8TTE.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
129 132first strand
Strand 2
C
135 138anti-parallel
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