Analysis of interatomic Contacts of Structural Units in PDB entry:
8TTG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8TTG entry

There are 2 chains in PDB entry 8TTG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1GLN 386
C
 SER 126PRO 140
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 16 helices in PDB entry 8TTG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 21Right-handed alpha
Helix 2
AA2
A
22 24Right-handed 310
Helix 3
AA3
A
25 34Right-handed alpha
Helix 4
AA4
A
36 65Right-handed alpha
Helix 5
AA5
A
66 87Right-handed alpha
Helix 6
AA6
A
90 120Right-handed alpha
Helix 7
AA7
A
124 141Right-handed alpha
Helix 8
AA8
A
141 151Right-handed alpha
Helix 9
AA9
A
156 177Right-handed alpha
Helix 10
AB1
A
204 232Right-handed alpha
Helix 11
AB2
A
236 264Right-handed alpha
Helix 12
AB3
A
267 288Right-handed alpha
Helix 13
AB4
A
291 300Right-handed alpha
Helix 14
AB5
A
301 322Right-handed alpha
Helix 15
AB6
A
324 354Right-handed alpha
Helix 16
AB7
A
356 386Right-handed alpha
Back to top of page

There is 1 sheet (AA1) in PDB entry 8TTG.

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
129 132first strand
Strand 2
C
135 138anti-parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il