Analysis of interatomic Contacts of Structural Units in PDB entry:
8TUA


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8TUA entry

There is 1 chain in PDB entry 8TUA (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 38CYS 1651
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 46 helices in PDB entry 8TUA. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
38 75Right-handed alpha
Helix 2
AA2
A
92 101Right-handed alpha
Helix 3
AA3
A
102 121Right-handed alpha
Helix 4
AA4
A
131 138Right-handed alpha
Helix 5
AA5
A
139 142Right-handed 310
Helix 6
AA6
A
143 165Right-handed alpha
Helix 7
AA7
A
165 180Right-handed alpha
Helix 8
AA8
A
187 213Right-handed alpha
Helix 9
AA9
A
219 237Right-handed alpha
Helix 10
AB1
A
238 256Right-handed alpha
Helix 11
AB2
A
332 334Right-handed 310
Helix 12
AB3
A
376 422Right-handed alpha
Helix 13
AB4
A
444 454Right-handed alpha
Helix 14
AB5
A
459 473Right-handed alpha
Helix 15
AB6
A
509 524Right-handed alpha
Helix 16
AB7
A
545 555Right-handed alpha
Helix 17
AB8
A
560 574Right-handed alpha
Helix 18
AB9
A
596 602Right-handed alpha
Helix 19
AC1
A
655 661Right-handed alpha
Helix 20
AC2
A
680 695Right-handed alpha
Helix 21
AC3
A
738 744Right-handed alpha
Helix 22
AC4
A
763 771Right-handed alpha
Helix 23
AC5
A
771 777Right-handed alpha
Helix 24
AC6
A
791 803Right-handed alpha
Helix 25
AC7
A
879 907Right-handed alpha
Helix 26
AC8
A
916 947Right-handed alpha
Helix 27
AC9
A
963 968Right-handed 310
Helix 28
AD1
A
1071 1108Right-handed alpha
Helix 29
AD2
A
1211 1238Right-handed alpha
Helix 30
AD3
A
1238 1248Right-handed alpha
Helix 31
AD4
A
1249 1251Right-handed 310
Helix 32
AD5
A
1256 1281Right-handed alpha
Helix 33
AD6
A
1284 1314Right-handed alpha
Helix 34
AD7
A
1316 1347Right-handed alpha
Helix 35
AD8
A
1359 1374Right-handed alpha
Helix 36
AD9
A
1389 1407Right-handed alpha
Helix 37
AE1
A
1445 1450Right-handed alpha
Helix 38
AE2
A
1453 1458Right-handed 310
Helix 39
AE3
A
1482 1515Right-handed alpha
Helix 40
AE4
A
1532 1551Right-handed alpha
Helix 41
AE5
A
1563 1575Right-handed alpha
Helix 42
AE6
A
1587 1606Right-handed alpha
Helix 43
AE7
A
1609 1611Right-handed 310
Helix 44
AE8
A
1612 1623Right-handed alpha
Helix 45
AE9
A
1624 1626Right-handed 310
Helix 46
AF1
A
1627 1632Right-handed alpha
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There are 11 sheets in PDB entry 8TUA. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
257 258first strand
Strand 2
A
325 331parallel
Strand 3
A
297 301anti-parallel
Strand 4
A
290 294anti-parallel
Strand 5
A
272 275anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
281 282first strand
Strand 2
A
285 286anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
336 340first strand
Strand 2
A
358 363anti-parallel
Strand 3
A
368 373anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
429 431first strand
Strand 2
A
438 443anti-parallel
Strand 3
A
491 494anti-parallel
Strand 4
A
476 478anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
530 534first strand
Strand 2
A
537 544anti-parallel
Strand 3
A
592 595anti-parallel
Strand 4
A
577 579anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
627 628first strand
Strand 2
A
698 699anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
640 642first strand
Strand 2
A
645 647anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
708 713first strand
Strand 2
A
841 847anti-parallel
Strand 3
A
750 754anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
723 724first strand
Strand 2
A
730 731anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
859 860first strand
Strand 2
A
866 867anti-parallel
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There are 6 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
873 874first strand
Strand 2
A
973 975anti-parallel
Strand 3
A
1022 1025anti-parallel
Strand 4
A
1578 1582parallel
Strand 5
A
1377 1380parallel
Strand 6
A
1464 1467parallel
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