Analysis of interatomic Contacts of Structural Units in PDB entry:
8TV3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8TV3 entry

There are 3 chains in PDB entry 8TV3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
L
 GLU 1GLU 212
H
 GLU 1LYS 222
A
 SER 23ALA 271
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 11 helices in PDB entry 8TV3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
L
79 83Right-handed 310
Helix 2
AA2
L
91 96Right-handed alpha
Helix 3
AA3
L
120 125Right-handed alpha
Helix 4
AA4
L
182 186Right-handed alpha
Helix 5
AA5
H
28 32Right-handed 310
Helix 6
AA6
H
74 76Right-handed 310
Helix 7
AA7
H
87 91Right-handed 310
Helix 8
AA8
H
164 166Right-handed 310
Helix 9
AA9
H
195 197Right-handed 310
Helix 10
AB1
H
209 212Right-handed 310
Helix 11
AB2
A
264 269Right-handed 310
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There are 12 sheets in PDB entry 8TV3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
4 7first strand
Strand 2
L
19 29anti-parallel
Strand 3
L
62 75anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
10 13first strand
Strand 2
L
101 105parallel
Strand 3
L
85 90anti-parallel
Strand 4
L
33 38anti-parallel
Strand 5
L
45 49anti-parallel
Strand 6
L
53 54anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
113 117first strand
Strand 2
L
128 138anti-parallel
Strand 3
L
172 181anti-parallel
Strand 4
L
158 162anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
L
152 153first strand
Strand 2
L
144 149anti-parallel
Strand 3
L
190 196anti-parallel
Strand 4
L
204 209anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
3 6first strand
Strand 2
H
18 25anti-parallel
Strand 3
H
78 83anti-parallel
Strand 4
H
69 73anti-parallel
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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 12first strand
Strand 2
H
115 119parallel
Strand 3
H
92 99anti-parallel
Strand 4
H
33 39anti-parallel
Strand 5
H
46 51anti-parallel
Strand 6
H
58 60anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
10 12first strand
Strand 2
H
115 119parallel
Strand 3
H
92 99anti-parallel
Strand 4
H
108 111anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
128 132first strand
Strand 2
H
143 153anti-parallel
Strand 3
H
184 193anti-parallel
Strand 4
H
171 173anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
128 132first strand
Strand 2
H
143 153anti-parallel
Strand 3
H
184 193anti-parallel
Strand 4
H
177 178anti-parallel
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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
159 162first strand
Strand 2
H
203 208anti-parallel
Strand 3
H
213 218anti-parallel
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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
29 33first strand
Strand 2
A
39 43anti-parallel
Strand 3
A
52 58anti-parallel
Strand 4
A
61 67anti-parallel
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There are 12 strands in AB3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
74 79first strand
Strand 2
A
85 90anti-parallel
Strand 3
A
96 102anti-parallel
Strand 4
A
109 116anti-parallel
Strand 5
A
121 126anti-parallel
Strand 6
A
132 138anti-parallel
Strand 7
A
144 148anti-parallel
Strand 8
A
156 161anti-parallel
Strand 9
A
166 171anti-parallel
Strand 10
A
175 179anti-parallel
Strand 11
A
188 192anti-parallel
Strand 12
A
197 198anti-parallel
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