Analysis of interatomic Contacts of Structural Units in PDB entry:
8TVX

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8TVX entry

There are 16 chains in PDB entry 8TVX (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	SER 8	MET 1454
B	ASP 20	PHE 1224
C	GLU 3	ASP 268
D	GLN 37	TYR 221
E	MET 1	MET 215
F	PRO 75	LEU 155
G	MET 1	ILE 171
H	MET 1	ARG 146
I	PHE 6	SER 122
J	MET 1	PRO 65
K	SER 17	PHE 120
L	ALA 25	ARG 70
N	G 31	G 47
T	C 1	C 17
T	T 19	G 29
R	A 1	A 10

There are146 helices in PDB entry 8TVX. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	23	31	Right-handed alpha
Helix 2	AA2	A	95	106	Right-handed alpha
Helix 3	AA3	A	119	127	Right-handed alpha
Helix 4	AA4	A	130	143	Right-handed alpha
Helix 5	AA5	A	203	213	Right-handed alpha
Helix 6	AA6	A	215	223	Right-handed alpha
Helix 7	AA7	A	230	233	Right-handed 310
Helix 8	AA8	A	243	247	Right-handed 310
Helix 9	AA9	A	260	282	Right-handed alpha
Helix 10	AB1	A	285	305	Right-handed alpha
Helix 11	AB2	A	324	330	Right-handed alpha
Helix 12	AB3	A	368	372	Right-handed alpha
Helix 13	AB4	A	384	395	Right-handed alpha
Helix 14	AB5	A	416	418	Right-handed 310
Helix 15	AB6	A	419	423	Right-handed 310
Helix 16	AB7	A	451	453	Right-handed 310
Helix 17	AB8	A	471	473	Right-handed 310
Helix 18	AB9	A	474	479	Right-handed alpha
Helix 19	AC1	A	494	505	Right-handed alpha
Helix 20	AC2	A	507	511	Right-handed 310
Helix 21	AC3	A	525	536	Right-handed alpha
Helix 22	AC4	A	543	553	Right-handed alpha
Helix 23	AC5	A	574	582	Right-handed alpha
Helix 24	AC6	A	618	623	Right-handed alpha
Helix 25	AC7	A	628	638	Right-handed alpha
Helix 26	AC8	A	638	659	Right-handed alpha
Helix 27	AC9	A	665	670	Right-handed alpha
Helix 28	AD1	A	672	699	Right-handed alpha
Helix 29	AD2	A	709	737	Right-handed alpha
Helix 30	AD3	A	741	750	Right-handed alpha
Helix 31	AD4	A	754	763	Right-handed alpha
Helix 32	AD5	A	794	798	Right-handed 310
Helix 33	AD6	A	809	845	Right-handed alpha
Helix 34	AD7	A	867	871	Right-handed 310
Helix 35	AD8	A	874	876	Right-handed 310
Helix 36	AD9	A	889	898	Right-handed alpha
Helix 37	AE1	A	909	913	Right-handed 310
Helix 38	AE2	A	922	947	Right-handed alpha
Helix 39	AE3	A	959	971	Right-handed alpha
Helix 40	AE4	A	982	996	Right-handed alpha
Helix 41	AE5	A	1004	1015	Right-handed alpha
Helix 42	AE6	A	1015	1026	Right-handed alpha
Helix 43	AE7	A	1027	1033	Right-handed alpha
Helix 44	AE8	A	1038	1057	Right-handed alpha
Helix 45	AE9	A	1063	1077	Right-handed alpha
Helix 46	AF1	A	1098	1106	Right-handed alpha
Helix 47	AF2	A	1121	1125	Right-handed 310
Helix 48	AF3	A	1127	1139	Right-handed alpha
Helix 49	AF4	A	1198	1205	Right-handed alpha
Helix 50	AF5	A	1208	1220	Right-handed alpha
Helix 51	AF6	A	1258	1271	Right-handed alpha
Helix 52	AF7	A	1312	1317	Right-handed alpha
Helix 53	AF8	A	1323	1327	Right-handed 310
Helix 54	AF9	A	1331	1339	Right-handed alpha
Helix 55	AG1	A	1340	1359	Right-handed alpha
Helix 56	AG2	A	1364	1375	Right-handed alpha
Helix 57	AG3	A	1388	1392	Right-handed 310
Helix 58	AG4	A	1395	1400	Right-handed alpha
Helix 59	AG5	A	1405	1416	Right-handed alpha
Helix 60	AG6	A	1423	1431	Right-handed alpha
Helix 61	AG7	A	1436	1439	Right-handed 310
Helix 62	AG8	A	1446	1453	Right-handed alpha
Helix 63	AG9	B	29	42	Right-handed alpha
Helix 64	AH1	B	44	57	Right-handed alpha
Helix 65	AH2	B	57	65	Right-handed alpha
Helix 66	AH3	B	113	121	Right-handed alpha
Helix 67	AH4	B	185	192	Right-handed alpha
Helix 68	AH5	B	264	267	Right-handed 310
Helix 69	AH6	B	282	289	Right-handed alpha
Helix 70	AH7	B	293	302	Right-handed alpha
Helix 71	AH8	B	307	321	Right-handed alpha
Helix 72	AH9	B	322	324	Right-handed 310
Helix 73	AI1	B	326	339	Right-handed alpha
Helix 74	AI2	B	348	359	Right-handed alpha
Helix 75	AI3	B	369	390	Right-handed alpha
Helix 76	AI4	B	400	402	Right-handed 310
Helix 77	AI5	B	408	435	Right-handed alpha
Helix 78	AI6	B	443	464	Right-handed alpha
Helix 79	AI7	B	487	496	Right-handed alpha
Helix 80	AI8	B	515	519	Right-handed 310
Helix 81	AI9	B	529	533	Right-handed 310
Helix 82	AJ1	B	551	561	Right-handed alpha
Helix 83	AJ2	B	567	569	Right-handed 310
Helix 84	AJ3	B	592	607	Right-handed alpha
Helix 85	AJ4	B	654	671	Right-handed alpha
Helix 86	AJ5	B	680	688	Right-handed alpha
Helix 87	AJ6	B	695	699	Right-handed alpha
Helix 88	AJ7	B	706	710	Right-handed 310
Helix 89	AJ8	B	711	716	Right-handed alpha
Helix 90	AJ9	B	744	749	Right-handed 310
Helix 91	AK1	B	750	756	Right-handed alpha
Helix 92	AK2	B	758	762	Right-handed 310
Helix 93	AK3	B	763	775	Right-handed alpha
Helix 94	AK4	B	782	787	Right-handed 310
Helix 95	AK5	B	808	813	Right-handed alpha
Helix 96	AK6	B	843	848	Right-handed alpha
Helix 97	AK7	B	1015	1021	Right-handed alpha
Helix 98	AK8	B	1022	1039	Right-handed alpha
Helix 99	AK9	B	1051	1062	Right-handed alpha
Helix 100	AL1	B	1098	1102	Right-handed 310
Helix 101	AL2	B	1121	1125	Right-handed 310
Helix 102	AL3	B	1131	1142	Right-handed alpha
Helix 103	AL4	B	1143	1153	Right-handed alpha
Helix 104	AL5	B	1197	1210	Right-handed alpha
Helix 105	AL6	C	26	40	Right-handed alpha
Helix 106	AL7	C	59	69	Right-handed alpha
Helix 107	AL8	C	76	80	Right-handed 310
Helix 108	AL9	C	116	118	Right-handed 310
Helix 109	AM1	C	167	171	Right-handed 310
Helix 110	AM2	C	196	201	Right-handed alpha
Helix 111	AM3	C	204	210	Right-handed 310
Helix 112	AM4	C	239	266	Right-handed alpha
Helix 113	AM5	D	51	73	Right-handed alpha
Helix 114	AM6	D	118	134	Right-handed alpha
Helix 115	AM7	D	138	151	Right-handed alpha
Helix 116	AM8	D	156	169	Right-handed alpha
Helix 117	AM9	D	173	183	Right-handed alpha
Helix 118	AN1	D	187	195	Right-handed alpha
Helix 119	AN2	D	195	202	Right-handed alpha
Helix 120	AN3	D	203	220	Right-handed alpha
Helix 121	AN4	E	6	27	Right-handed alpha
Helix 122	AN5	E	31	36	Right-handed alpha
Helix 123	AN6	E	38	47	Right-handed alpha
Helix 124	AN7	E	55	59	Right-handed 310
Helix 125	AN8	E	65	72	Right-handed alpha
Helix 126	AN9	E	89	104	Right-handed alpha
Helix 127	AO1	E	117	124	Right-handed alpha
Helix 128	AO2	E	138	142	Right-handed 310
Helix 129	AO3	E	143	147	Right-handed 310
Helix 130	AO4	E	157	169	Right-handed alpha
Helix 131	AO5	E	171	175	Right-handed 310
Helix 132	AO6	E	182	189	Right-handed alpha
Helix 133	AO7	F	86	103	Right-handed alpha
Helix 134	AO8	F	116	127	Right-handed alpha
Helix 135	AO9	G	14	18	Right-handed 310
Helix 136	AP1	G	19	20	Right-handed 310
Helix 137	AP2	G	21	35	Right-handed alpha
Helix 138	AP3	G	113	115	Right-handed 310
Helix 139	AP4	I	61	65	Right-handed 310
Helix 140	AP5	I	116	122	Right-handed alpha
Helix 141	AP6	J	17	27	Right-handed alpha
Helix 142	AP7	J	31	39	Right-handed alpha
Helix 143	AP8	J	43	53	Right-handed alpha
Helix 144	AP9	J	56	62	Right-handed alpha
Helix 145	AQ1	K	39	52	Right-handed alpha
Helix 146	AQ2	K	82	117	Right-handed alpha

There are 40 sheets in PDB entry 8TVX. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1418	1419	first strand
Strand 2	A	16	18	anti-parallel
Strand 3	B	1215	1217	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	82	91	first strand
Strand 2	A	235	241	anti-parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	151	153	first strand
Strand 2	A	161	163	anti-parallel

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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	173	177	first strand
Strand 2	A	180	184	anti-parallel
Strand 3	A	200	201	anti-parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	343	345	first strand
Strand 2	B	1128	1130	anti-parallel

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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1104	1106	first strand
Strand 2	A	348	355	anti-parallel
Strand 3	A	486	490	anti-parallel
Strand 4	A	442	445	anti-parallel
Strand 5	A	455	463	anti-parallel
Strand 6	A	363	367	parallel
Strand 7	A	468	470	anti-parallel
Strand 8	A	348	355	parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	375	379	first strand
Strand 2	A	431	435	anti-parallel
Strand 3	A	402	406	anti-parallel
Strand 4	A	412	414	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	540	542	first strand
Strand 2	A	571	573	anti-parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	587	590	first strand
Strand 2	A	605	608	anti-parallel

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There are 8 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	662	663	first strand
Strand 2	B	821	829	anti-parallel
Strand 3	B	1010	1012	parallel
Strand 4	B	839	842	anti-parallel
Strand 5	B	987	994	parallel
Strand 6	B	979	981	anti-parallel
Strand 7	B	1085	1094	anti-parallel
Strand 8	B	1069	1070	anti-parallel

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There are 4 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	662	663	first strand
Strand 2	B	821	829	anti-parallel
Strand 3	B	1085	1094	anti-parallel
Strand 4	B	1069	1070	anti-parallel

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There are 3 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	849	850	first strand
Strand 2	A	856	857	anti-parallel
Strand 3	A	863	865	anti-parallel

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There are 2 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	878	882	first strand
Strand 2	A	953	957	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1282	1292	first strand
Strand 2	A	1298	1309	anti-parallel
Strand 3	A	1115	1119	anti-parallel
Strand 4	A	1328	1329	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1141	1142	first strand
Strand 2	A	1272	1274	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1237	1240	first strand
Strand 2	A	1191	1197	anti-parallel
Strand 3	A	1147	1154	anti-parallel
Strand 4	I	44	47	anti-parallel

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There are 7 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	48	50	first strand
Strand 2	G	2	13	anti-parallel
Strand 3	G	68	79	anti-parallel
Strand 4	G	59	61	anti-parallel
Strand 5	A	1441	1445	anti-parallel
Strand 6	F	132	137	anti-parallel
Strand 7	F	143	147	anti-parallel

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There are 5 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	48	50	first strand
Strand 2	G	2	13	anti-parallel
Strand 3	G	68	79	anti-parallel
Strand 4	G	43	49	anti-parallel
Strand 5	G	37	39	anti-parallel

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There are 4 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	68	71	first strand
Strand 2	B	88	97	anti-parallel
Strand 3	B	125	136	anti-parallel
Strand 4	B	165	171	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	203	205	first strand
Strand 2	B	208	212	anti-parallel
Strand 3	B	480	482	anti-parallel

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There are 4 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	404	407	first strand
Strand 2	B	214	218	anti-parallel
Strand 3	B	497	499	parallel
Strand 4	B	537	538	anti-parallel

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There are 5 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	222	227	first strand
Strand 2	B	234	241	anti-parallel
Strand 3	B	253	259	anti-parallel
Strand 4	B	269	273	anti-parallel
Strand 5	B	276	281	anti-parallel

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There are 3 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	544	545	first strand
Strand 2	B	633	641	anti-parallel
Strand 3	B	690	694	anti-parallel

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There are 4 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	650	651	first strand
Strand 2	B	633	641	anti-parallel
Strand 3	B	740	741	anti-parallel
Strand 4	B	703	704	parallel

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There are 5 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	564	565	first strand
Strand 2	B	585	590	anti-parallel
Strand 3	B	578	582	anti-parallel
Strand 4	B	623	627	parallel
Strand 5	B	614	618	anti-parallel

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There are 6 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	793	796	first strand
Strand 2	B	853	862	anti-parallel
Strand 3	B	962	972	anti-parallel
Strand 4	B	948	956	anti-parallel
Strand 5	L	56	58	anti-parallel
Strand 6	L	29	31	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	804	805	first strand
Strand 2	B	1042	1043	parallel

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There are 2 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1001	1002	first strand
Strand 2	B	1072	1073	anti-parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1159	1163	first strand
Strand 2	B	1191	1195	anti-parallel

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There are 2 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1172	1174	first strand
Strand 2	B	1179	1181	anti-parallel

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There are 4 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	7	13	first strand
Strand 2	C	17	23	anti-parallel
Strand 3	C	228	234	anti-parallel
Strand 4	C	173	179	anti-parallel

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There are 5 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	119	120	first strand
Strand 2	C	97	104	anti-parallel
Strand 3	C	152	162	anti-parallel
Strand 4	C	43	54	anti-parallel
Strand 5	L	65	68	anti-parallel

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There are 2 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	111	114	first strand
Strand 2	C	143	147	anti-parallel

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There are 4 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	60	61	first strand
Strand 2	E	78	82	anti-parallel
Strand 3	E	107	112	parallel
Strand 4	E	131	136	parallel

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There are 4 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	152	156	first strand
Strand 2	E	195	200	anti-parallel
Strand 3	E	208	214	anti-parallel
Strand 4	E	177	178	parallel

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There are 5 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	90	95	first strand
Strand 2	G	98	103	anti-parallel
Strand 3	G	106	111	anti-parallel
Strand 4	G	157	162	parallel
Strand 5	G	146	152	anti-parallel

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There are 9 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	6	16	first strand
Strand 2	H	24	30	anti-parallel
Strand 3	H	37	42	anti-parallel
Strand 4	H	121	126	anti-parallel
Strand 5	H	111	118	anti-parallel
Strand 6	H	95	107	anti-parallel
Strand 7	H	139	145	anti-parallel
Strand 8	H	54	60	anti-parallel
Strand 9	H	6	16	anti-parallel

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There are 3 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	16	19	first strand
Strand 2	I	24	27	anti-parallel
Strand 3	I	36	37	anti-parallel

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There are 3 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	I	83	86	first strand
Strand 2	I	100	103	anti-parallel
Strand 3	I	109	111	anti-parallel

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There are 4 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	K	19	23	first strand
Strand 2	K	30	36	anti-parallel
Strand 3	K	70	77	anti-parallel
Strand 4	K	56	63	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8TVX

Analysis of interatomic Contacts of Structural Units in PDB entry:
8TVX