Analysis of interatomic Contacts of Structural Units in PDB entry:
8TW1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8TW1 entry

There is 1 chain in PDB entry 8TW1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ASN 277
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 8TW1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
2 12Right-handed alpha
Helix 2
AA2
A
33 45Right-handed alpha
Helix 3
AA3
A
57 64Right-handed alpha
Helix 4
AA4
A
91 95Right-handed 310
Helix 5
AA5
A
96 98Right-handed 310
Helix 6
AA6
A
131 139Right-handed alpha
Helix 7
AA7
A
151 156Right-handed alpha
Helix 8
AA8
A
159 164Right-handed alpha
Helix 9
AA9
A
187 191Right-handed 310
Helix 10
AB1
A
196 201Right-handed alpha
Helix 11
AB2
A
205 207Right-handed 310
Helix 12
AB3
A
221 225Right-handed 310
Helix 13
AB4
A
271 276Right-handed alpha
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There are 5 sheets in PDB entry 8TW1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
18 19first strand
Strand 2
A
31 32parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
67 72first strand
Strand 2
A
142 148anti-parallel
Strand 3
A
83 87anti-parallel
Strand 4
A
100 105anti-parallel
Strand 5
A
110 114anti-parallel
Strand 6
A
126 130anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
171 172first strand
Strand 2
A
230 232anti-parallel
Strand 3
A
208 210anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
175 179first strand
Strand 2
A
182 186anti-parallel
Strand 3
A
202 203anti-parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
240 249first strand
Strand 2
A
252 259anti-parallel
Strand 3
A
264 267anti-parallel
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