Analysis of interatomic Contacts of Structural Units in PDB entry:
8TWG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8TWG entry

There is 1 chain in PDB entry 8TWG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 LYS 3GLU 387
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 8TWG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
14 26Right-handed alpha
Helix 2
AA2
B
50 59Right-handed alpha
Helix 3
AA3
B
61 68Right-handed alpha
Helix 4
AA4
B
91 95Right-handed 310
Helix 5
AA5
B
105 115Right-handed alpha
Helix 6
AA6
B
160 167Right-handed alpha
Helix 7
AA7
B
168 170Right-handed 310
Helix 8
AA8
B
234 246Right-handed alpha
Helix 9
AA9
B
252 258Right-handed alpha
Helix 10
AB1
B
259 263Right-handed 310
Helix 11
AB2
B
288 293Right-handed alpha
Helix 12
AB3
B
295 299Right-handed 310
Helix 13
AB4
B
300 319Right-handed alpha
Helix 14
AB5
B
322 350Right-handed alpha
Helix 15
AB6
B
359 379Right-handed alpha
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There are 4 sheets in PDB entry 8TWG. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
121 123first strand
Strand 2
B
31 34parallel
Strand 3
B
7 10parallel
Strand 4
B
151 154parallel
Strand 5
B
284 286parallel
Strand 6
B
280 281anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
45 48first strand
Strand 2
B
101 104anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
84 89first strand
Strand 2
B
74 78anti-parallel
Strand 3
B
195 201parallel
Strand 4
B
204 210anti-parallel
Strand 5
B
216 224anti-parallel
Strand 6
B
172 187anti-parallel
Strand 7
B
267 276anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
127 132first strand
Strand 2
B
137 141anti-parallel
Strand 3
B
146 149anti-parallel
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