Analysis of interatomic Contacts of Structural Units in PDB entry:
8TWY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8TWY entry

There is 1 chain in PDB entry 8TWY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 107ASP 1045
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 38 helices in PDB entry 8TWY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
107 122Right-handed alpha
Helix 2
AA2
A
124 130Right-handed alpha
Helix 3
AA3
A
133 143Right-handed alpha
Helix 4
AA4
A
143 155Right-handed alpha
Helix 5
AA5
A
157 167Right-handed alpha
Helix 6
AA6
A
178 184Right-handed alpha
Helix 7
AA7
A
216 230Right-handed alpha
Helix 8
AA8
A
266 269Right-handed 310
Helix 9
AA9
A
270 279Right-handed alpha
Helix 10
AB1
A
290 296Right-handed alpha
Helix 11
AB2
A
394 396Right-handed 310
Helix 12
AB3
A
488 499Right-handed alpha
Helix 13
AB4
A
524 537Right-handed alpha
Helix 14
AB5
A
544 554Right-handed alpha
Helix 15
AB6
A
556 563Right-handed 310
Helix 16
AB7
A
564 571Right-handed alpha
Helix 17
AB8
A
576 589Right-handed alpha
Helix 18
AB9
A
594 601Right-handed alpha
Helix 19
AC1
A
608 623Right-handed alpha
Helix 20
AC2
A
624 631Right-handed alpha
Helix 21
AC3
A
631 640Right-handed alpha
Helix 22
AC4
A
647 660Right-handed alpha
Helix 23
AC5
A
660 673Right-handed alpha
Helix 24
AC6
A
680 695Right-handed alpha
Helix 25
AC7
A
697 720Right-handed alpha
Helix 26
AC8
A
727 740Right-handed alpha
Helix 27
AC9
A
741 749Right-handed alpha
Helix 28
AD1
A
765 769Right-handed 310
Helix 29
AD2
A
789 793Right-handed 310
Helix 30
AD3
A
807 828Right-handed alpha
Helix 31
AD4
A
857 864Right-handed alpha
Helix 32
AD5
A
875 885Right-handed alpha
Helix 33
AD6
A
888 912Right-handed alpha
Helix 34
AD7
A
957 964Right-handed alpha
Helix 35
AD8
A
974 993Right-handed alpha
Helix 36
AD9
A
994 1006Right-handed alpha
Helix 37
AE1
A
1015 1026Right-handed alpha
Helix 38
AE2
A
1031 1045Right-handed alpha
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There are 7 sheets in PDB entry 8TWY. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
204 212first strand
Strand 2
A
189 197anti-parallel
Strand 3
A
284 289parallel
Strand 4
A
250 254anti-parallel
Strand 5
A
260 261anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
382 392first strand
Strand 2
A
333 342anti-parallel
Strand 3
A
472 477anti-parallel
Strand 4
A
439 444anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
365 366first strand
Strand 2
A
355 362anti-parallel
Strand 3
A
371 372anti-parallel
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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
365 366first strand
Strand 2
A
355 362anti-parallel
Strand 3
A
400 408anti-parallel
Strand 4
A
420 428anti-parallel
Strand 5
A
446 447anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
751 753first strand
Strand 2
A
756 761anti-parallel
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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
770 771first strand
Strand 2
A
779 784anti-parallel
Strand 3
A
796 803anti-parallel
Strand 4
A
845 849anti-parallel
Strand 5
A
838 840anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
854 856first strand
Strand 2
A
921 924anti-parallel
Strand 3
A
929 931anti-parallel
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