Analysis of interatomic Contacts of Structural Units in PDB entry:
8TZ0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8TZ0 entry

There are 2 chains in PDB entry 8TZ0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2TYR 506
B
 ALA 2LEU 169
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 62 helices in PDB entry 8TZ0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
6 16Right-handed alpha
Helix 2
AA2
A
22 32Right-handed alpha
Helix 3
AA3
A
40 45Right-handed alpha
Helix 4
AA4
A
46 61Right-handed alpha
Helix 5
AA5
A
73 75Right-handed 310
Helix 6
AA6
A
76 91Right-handed alpha
Helix 7
AA7
A
146 165Right-handed alpha
Helix 8
AA8
A
166 169Right-handed 310
Helix 9
AA9
A
211 222Right-handed alpha
Helix 10
AB1
A
240 246Right-handed 310
Helix 11
AB2
A
251 255Right-handed 310
Helix 12
AB3
A
258 267Right-handed alpha
Helix 13
AB4
A
280 289Right-handed alpha
Helix 14
AB5
A
302 312Right-handed alpha
Helix 15
AB6
A
342 346Right-handed 310
Helix 16
AB7
A
353 362Right-handed alpha
Helix 17
AB8
A
367 377Right-handed alpha
Helix 18
AB9
A
382 394Right-handed alpha
Helix 19
AC1
A
397 404Right-handed 310
Helix 20
AC2
A
407 416Right-handed alpha
Helix 21
AC3
A
419 425Right-handed alpha
Helix 22
AC4
A
437 457Right-handed alpha
Helix 23
AC5
A
491 494Right-handed 310
Helix 24
AC6
A
495 506Right-handed alpha
Helix 25
AC7
B
6 18Right-handed alpha
Helix 26
AC8
B
22 32Right-handed alpha
Helix 27
AC9
B
40 45Right-handed alpha
Helix 28
AD1
B
46 61Right-handed alpha
Helix 29
AD2
B
76 91Right-handed alpha
Helix 30
AD3
B
146 165Right-handed alpha
Helix 31
AD4
B
166 169Right-handed 310
Helix 32
AD5
B
211 222Right-handed alpha
Helix 33
AD6
B
240 246Right-handed 310
Helix 34
AD7
B
251 255Right-handed 310
Helix 35
AD8
B
258 267Right-handed alpha
Helix 36
AD9
B
280 289Right-handed alpha
Helix 37
AE1
B
302 312Right-handed alpha
Helix 38
AE2
B
342 346Right-handed 310
Helix 39
AE3
B
353 362Right-handed alpha
Helix 40
AE4
B
367 377Right-handed alpha
Helix 41
AE5
B
382 393Right-handed alpha
Helix 42
AE6
B
397 404Right-handed 310
Helix 43
AE7
B
407 415Right-handed alpha
Helix 44
AE8
B
421 425Right-handed alpha
Helix 45
AE9
B
437 457Right-handed alpha
Helix 46
AF1
B
491 494Right-handed 310
Helix 47
AF2
B
495 507Right-handed alpha
Helix 48
AF3
C
8 24Right-handed alpha
Helix 49
AF4
C
26 33Right-handed alpha
Helix 50
AF5
C
89 93Right-handed 310
Helix 51
AF6
C
142 147Right-handed alpha
Helix 52
AF7
C
148 152Right-handed 310
Helix 53
AF8
C
155 159Right-handed 310
Helix 54
AF9
C
166 178Right-handed alpha
Helix 55
AG1
D
8 24Right-handed alpha
Helix 56
AG2
D
26 33Right-handed alpha
Helix 57
AG3
D
142 147Right-handed alpha
Helix 58
AG4
D
148 152Right-handed 310
Helix 59
AG5
D
155 159Right-handed 310
Helix 60
AG6
D
166 179Right-handed alpha
Helix 61
AG7
E
39 50Right-handed alpha
Helix 62
AG8
E
56 60Right-handed 310
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There are 8 sheets in PDB entry 8TZ0. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 7 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
95 97first strand
Strand 2
A
66 71parallel
Strand 3
A
35 39parallel
Strand 4
A
105 109parallel
Strand 5
A
120 126parallel
Strand 6
A
129 133anti-parallel
Strand 7
A
177 181anti-parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
273 277first strand
Strand 2
A
228 234parallel
Strand 3
A
201 208parallel
Strand 4
A
295 298parallel
Strand 5
A
317 323parallel
Strand 6
A
326 332anti-parallel
Strand 7
A
466 469anti-parallel
Strand 8
A
480 481anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
95 97first strand
Strand 2
B
66 71parallel
Strand 3
B
35 39parallel
Strand 4
B
105 109parallel
Strand 5
B
120 126parallel
Strand 6
B
129 133anti-parallel
Strand 7
B
177 181anti-parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
271 277first strand
Strand 2
B
227 234parallel
Strand 3
B
200 208parallel
Strand 4
B
295 298parallel
Strand 5
B
316 322parallel
Strand 6
B
327 333anti-parallel
Strand 7
B
466 469anti-parallel
Strand 8
B
480 481anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
35 41first strand
Strand 2
C
44 50anti-parallel
Strand 3
C
59 66anti-parallel
Strand 4
C
76 79anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
126 127first strand
Strand 2
C
136 137anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
35 41first strand
Strand 2
D
44 50anti-parallel
Strand 3
D
59 66anti-parallel
Strand 4
D
76 79anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
27 30first strand
Strand 2
E
21 24anti-parallel
Strand 3
E
86 90parallel
Strand 4
E
61 63anti-parallel
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