Analysis of interatomic Contacts of Structural Units in PDB entry:
8TZ3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8TZ3 entry

There are 3 chains in PDB entry 8TZ3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLU 90PRO 622
C
 GLU 90PRO 622
B
 GLU 90PRO 622
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 90 helices in PDB entry 8TZ3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
90 103Right-handed alpha
Helix 2
AA2
A
103 130Right-handed alpha
Helix 3
AA3
A
130 157Right-handed alpha
Helix 4
AA4
A
157 198Right-handed alpha
Helix 5
AA5
A
198 203Right-handed alpha
Helix 6
AA6
A
203 223Right-handed alpha
Helix 7
AA7
A
232 252Right-handed alpha
Helix 8
AA8
A
252 270Right-handed alpha
Helix 9
AA9
A
272 281Right-handed alpha
Helix 10
AB1
A
284 287Right-handed 310
Helix 11
AB2
A
288 293Right-handed alpha
Helix 12
AB3
A
294 311Right-handed alpha
Helix 13
AB4
A
312 330Right-handed alpha
Helix 14
AB5
A
332 343Right-handed alpha
Helix 15
AB6
A
349 361Right-handed 310
Helix 16
AB7
A
362 376Right-handed alpha
Helix 17
AB8
A
378 380Right-handed 310
Helix 18
AB9
A
381 389Right-handed alpha
Helix 19
AC1
A
391 414Right-handed alpha
Helix 20
AC2
A
423 429Right-handed alpha
Helix 21
AC3
A
437 479Right-handed alpha
Helix 22
AC4
A
480 482Right-handed 310
Helix 23
AC5
A
487 496Right-handed alpha
Helix 24
AC6
A
496 503Right-handed alpha
Helix 25
AC7
A
506 523Right-handed alpha
Helix 26
AC8
A
524 542Right-handed alpha
Helix 27
AC9
A
555 566Right-handed alpha
Helix 28
AD1
A
571 573Right-handed 310
Helix 29
AD2
A
574 586Right-handed alpha
Helix 30
AD3
A
589 619Right-handed alpha
Helix 31
AD4
C
91 103Right-handed alpha
Helix 32
AD5
C
103 130Right-handed alpha
Helix 33
AD6
C
130 157Right-handed alpha
Helix 34
AD7
C
157 198Right-handed alpha
Helix 35
AD8
C
198 203Right-handed alpha
Helix 36
AD9
C
203 223Right-handed alpha
Helix 37
AE1
C
232 252Right-handed alpha
Helix 38
AE2
C
252 270Right-handed alpha
Helix 39
AE3
C
272 281Right-handed alpha
Helix 40
AE4
C
284 287Right-handed 310
Helix 41
AE5
C
288 293Right-handed alpha
Helix 42
AE6
C
294 311Right-handed alpha
Helix 43
AE7
C
312 330Right-handed alpha
Helix 44
AE8
C
332 343Right-handed alpha
Helix 45
AE9
C
349 361Right-handed 310
Helix 46
AF1
C
362 376Right-handed alpha
Helix 47
AF2
C
378 380Right-handed 310
Helix 48
AF3
C
381 389Right-handed alpha
Helix 49
AF4
C
391 414Right-handed alpha
Helix 50
AF5
C
423 429Right-handed alpha
Helix 51
AF6
C
437 479Right-handed alpha
Helix 52
AF7
C
480 482Right-handed 310
Helix 53
AF8
C
487 496Right-handed alpha
Helix 54
AF9
C
496 503Right-handed alpha
Helix 55
AG1
C
506 523Right-handed alpha
Helix 56
AG2
C
524 542Right-handed alpha
Helix 57
AG3
C
555 566Right-handed alpha
Helix 58
AG4
C
571 573Right-handed 310
Helix 59
AG5
C
574 586Right-handed alpha
Helix 60
AG6
C
589 619Right-handed alpha
Helix 61
AG7
B
91 103Right-handed alpha
Helix 62
AG8
B
103 130Right-handed alpha
Helix 63
AG9
B
130 157Right-handed alpha
Helix 64
AH1
B
157 198Right-handed alpha
Helix 65
AH2
B
198 203Right-handed alpha
Helix 66
AH3
B
203 223Right-handed alpha
Helix 67
AH4
B
232 252Right-handed alpha
Helix 68
AH5
B
252 270Right-handed alpha
Helix 69
AH6
B
272 281Right-handed alpha
Helix 70
AH7
B
284 287Right-handed 310
Helix 71
AH8
B
288 293Right-handed alpha
Helix 72
AH9
B
294 311Right-handed alpha
Helix 73
AI1
B
312 330Right-handed alpha
Helix 74
AI2
B
332 343Right-handed alpha
Helix 75
AI3
B
349 361Right-handed 310
Helix 76
AI4
B
362 376Right-handed alpha
Helix 77
AI5
B
378 380Right-handed 310
Helix 78
AI6
B
381 389Right-handed alpha
Helix 79
AI7
B
391 414Right-handed alpha
Helix 80
AI8
B
423 429Right-handed alpha
Helix 81
AI9
B
437 479Right-handed alpha
Helix 82
AJ1
B
480 482Right-handed 310
Helix 83
AJ2
B
487 496Right-handed alpha
Helix 84
AJ3
B
496 503Right-handed alpha
Helix 85
AJ4
B
506 523Right-handed alpha
Helix 86
AJ5
B
524 542Right-handed alpha
Helix 87
AJ6
B
555 566Right-handed alpha
Helix 88
AJ7
B
571 573Right-handed 310
Helix 89
AJ8
B
574 586Right-handed alpha
Helix 90
AJ9
B
589 619Right-handed alpha
Back to top of page

There are 3 sheets in PDB entry 8TZ3. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
546 547first strand
Strand 2
A
550 551anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
546 547first strand
Strand 2
C
550 551anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
546 547first strand
Strand 2
B
550 551anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il