Analysis of interatomic Contacts of Structural Units in PDB entry:
8TZH

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8TZH entry

There are 2 chains in PDB entry 8TZH (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
B	THR 45	LYS 169
A	LEU 627	ARG 2522

There are 60 helices in PDB entry 8TZH. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	B	51	60	Right-handed alpha
Helix 2	AA2	B	61	70	Right-handed alpha
Helix 3	AA3	B	84	93	Right-handed alpha
Helix 4	AA4	B	94	105	Right-handed alpha
Helix 5	AA5	B	117	125	Right-handed alpha
Helix 6	AA6	B	127	136	Right-handed alpha
Helix 7	AA7	B	150	159	Right-handed alpha
Helix 8	AA8	B	160	169	Right-handed alpha
Helix 9	AA9	A	628	638	Right-handed alpha
Helix 10	AB1	A	642	648	Right-handed 310
Helix 11	AB2	A	650	650	Right-handed 310
Helix 12	AB3	A	651	655	Right-handed alpha
Helix 13	AB4	A	670	681	Right-handed alpha
Helix 14	AB5	A	689	700	Right-handed alpha
Helix 15	AB6	A	709	719	Right-handed alpha
Helix 16	AB7	A	721	731	Right-handed alpha
Helix 17	AB8	A	744	751	Right-handed alpha
Helix 18	AB9	A	754	764	Right-handed alpha
Helix 19	AC1	A	767	781	Right-handed alpha
Helix 20	AC2	A	785	795	Right-handed alpha
Helix 21	AC3	A	814	819	Right-handed 310
Helix 22	AC4	A	835	847	Right-handed alpha
Helix 23	AC5	A	1008	1013	Right-handed 310
Helix 24	AC6	A	1027	1034	Right-handed alpha
Helix 25	AC7	A	1053	1057	Right-handed 310
Helix 26	AC8	A	1101	1106	Right-handed alpha
Helix 27	AC9	A	1189	1195	Right-handed alpha
Helix 28	AD1	A	1213	1218	Right-handed alpha
Helix 29	AD2	A	1261	1267	Right-handed 310
Helix 30	AD3	A	1285	1291	Right-handed 310
Helix 31	AD4	A	1315	1328	Right-handed alpha
Helix 32	AD5	A	1347	1354	Right-handed alpha
Helix 33	AD6	A	1398	1408	Right-handed 310
Helix 34	AD7	A	1420	1423	Right-handed 310
Helix 35	AD8	A	1424	1431	Right-handed alpha
Helix 36	AD9	A	1431	1442	Right-handed alpha
Helix 37	AE1	A	1465	1473	Right-handed alpha
Helix 38	AE2	A	1496	1510	Right-handed alpha
Helix 39	AE3	A	1525	1540	Right-handed alpha
Helix 40	AE4	A	1550	1557	Right-handed alpha
Helix 41	AE5	A	1567	1579	Right-handed alpha
Helix 42	AE6	A	1599	1607	Right-handed alpha
Helix 43	AE7	A	1608	1612	Right-handed 310
Helix 44	AE8	A	1645	1657	Right-handed alpha
Helix 45	AE9	A	1704	1712	Right-handed alpha
Helix 46	AF1	A	1770	1792	Right-handed alpha
Helix 47	AF2	A	1828	1835	Right-handed alpha
Helix 48	AF3	A	1852	1856	Right-handed alpha
Helix 49	AF4	A	1915	1925	Right-handed alpha
Helix 50	AF5	A	1954	1962	Right-handed alpha
Helix 51	AF6	A	1967	1988	Right-handed alpha
Helix 52	AF7	A	2053	2069	Right-handed alpha
Helix 53	AF8	A	2079	2084	Right-handed 310
Helix 54	AF9	A	2094	2100	Right-handed alpha
Helix 55	AG1	A	2107	2115	Right-handed alpha
Helix 56	AG2	A	2124	2133	Right-handed alpha
Helix 57	AG3	A	2134	2139	Right-handed alpha
Helix 58	AG4	A	2346	2351	Right-handed alpha
Helix 59	AG5	A	2389	2396	Right-handed alpha
Helix 60	AG6	A	2499	2522	Right-handed alpha

There are 18 sheets in PDB entry 8TZH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	796	797	first strand
Strand 2	A	802	803	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	986	988	first strand
Strand 2	A	1015	1017	parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1063	1065	first strand
Strand 2	A	1087	1090	parallel
Strand 3	A	1111	1113	parallel
Strand 4	A	1133	1135	parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1177	1179	first strand
Strand 2	A	1200	1202	parallel
Strand 3	A	1224	1226	parallel
Strand 4	A	1249	1251	parallel
Strand 5	A	1272	1274	parallel

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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1329	1331	first strand
Strand 2	A	1522	1524	anti-parallel

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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1335	1339	first strand
Strand 2	A	1390	1394	parallel
Strand 3	A	1373	1376	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1415	1416	first strand
Strand 2	A	1447	1450	parallel
Strand 3	A	1482	1486	parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1547	1549	first strand
Strand 2	A	1595	1597	anti-parallel

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There are 5 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1690	1694	first strand
Strand 2	A	1764	1768	anti-parallel
Strand 3	A	1746	1750	anti-parallel
Strand 4	A	1740	1743	anti-parallel
Strand 5	A	1730	1731	anti-parallel

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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1840	1841	first strand
Strand 2	A	1850	1851	anti-parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1884	1887	first strand
Strand 2	A	1892	1895	anti-parallel
Strand 3	A	1904	1906	anti-parallel
Strand 4	A	1945	1947	anti-parallel
Strand 5	A	1935	1938	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2000	2002	first strand
Strand 2	A	2013	2015	anti-parallel

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There are 4 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2140	2145	first strand
Strand 2	A	2491	2497	anti-parallel
Strand 3	A	2469	2475	anti-parallel
Strand 4	A	2458	2461	anti-parallel

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There are 3 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2155	2156	first strand
Strand 2	A	2167	2169	anti-parallel
Strand 3	A	2181	2182	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2247	2249	first strand
Strand 2	A	2264	2266	anti-parallel

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There are 4 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2300	2304	first strand
Strand 2	A	2316	2319	anti-parallel
Strand 3	A	2322	2325	anti-parallel
Strand 4	A	2336	2337	anti-parallel

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There are 4 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2354	2359	first strand
Strand 2	A	2362	2367	anti-parallel
Strand 3	A	2372	2377	anti-parallel
Strand 4	A	2383	2388	anti-parallel

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There are 4 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	2414	2420	first strand
Strand 2	A	2424	2429	anti-parallel
Strand 3	A	2434	2438	anti-parallel
Strand 4	A	2443	2447	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8TZH

Analysis of interatomic Contacts of Structural Units in PDB entry:
8TZH