Analysis of interatomic Contacts of Structural Units in PDB entry:
8TZK

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8TZK entry

There are 5 chains in PDB entry 8TZK (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 9	VAL 228
B	GLY 9	VAL 228
C	ALA 27	VAL 330
D	ALA 27	VAL 330
E	LEU 91	LEU 191

There are 35 helices in PDB entry 8TZK. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	49	58	Right-handed alpha
Helix 2	AA2	A	82	89	Right-handed alpha
Helix 3	AA3	A	104	116	Right-handed alpha
Helix 4	AA4	A	119	134	Right-handed alpha
Helix 5	AA5	A	148	162	Right-handed alpha
Helix 6	AA6	A	178	196	Right-handed alpha
Helix 7	AA7	A	205	212	Right-handed alpha
Helix 8	AA8	B	49	58	Right-handed alpha
Helix 9	AA9	B	82	89	Right-handed alpha
Helix 10	AB1	B	104	116	Right-handed alpha
Helix 11	AB2	B	119	134	Right-handed alpha
Helix 12	AB3	B	148	162	Right-handed alpha
Helix 13	AB4	B	178	196	Right-handed alpha
Helix 14	AB5	B	205	212	Right-handed alpha
Helix 15	AB6	C	31	47	Right-handed alpha
Helix 16	AB7	C	50	86	Right-handed alpha
Helix 17	AB8	C	100	114	Right-handed alpha
Helix 18	AB9	C	124	136	Right-handed alpha
Helix 19	AC1	C	162	178	Right-handed alpha
Helix 20	AC2	C	193	229	Right-handed alpha
Helix 21	AC3	C	229	240	Right-handed alpha
Helix 22	AC4	C	242	287	Right-handed alpha
Helix 23	AC5	C	297	326	Right-handed alpha
Helix 24	AC6	D	31	47	Right-handed alpha
Helix 25	AC7	D	50	85	Right-handed alpha
Helix 26	AC8	D	100	114	Right-handed alpha
Helix 27	AC9	D	124	135	Right-handed alpha
Helix 28	AD1	D	138	145	Right-handed alpha
Helix 29	AD2	D	162	176	Right-handed alpha
Helix 30	AD3	D	188	229	Right-handed alpha
Helix 31	AD4	D	229	239	Right-handed alpha
Helix 32	AD5	D	242	286	Right-handed alpha
Helix 33	AD6	D	297	326	Right-handed alpha
Helix 34	AD7	E	92	129	Right-handed alpha
Helix 35	AD8	E	144	191	Right-handed alpha

There are 10 sheets in PDB entry 8TZK. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	33	34	first strand
Strand 2	A	11	14	anti-parallel
Strand 3	A	67	69	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	16	18	first strand
Strand 2	A	27	30	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	39	40	first strand
Strand 2	A	198	202	parallel
Strand 3	A	167	171	parallel
Strand 4	A	90	94	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	43	44	first strand
Strand 2	A	219	221	parallel
Strand 3	A	224	225	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	33	34	first strand
Strand 2	B	11	14	anti-parallel
Strand 3	B	67	69	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	16	18	first strand
Strand 2	B	27	30	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	39	40	first strand
Strand 2	B	198	202	parallel
Strand 3	B	167	171	parallel
Strand 4	B	90	94	parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	43	44	first strand
Strand 2	B	219	221	parallel
Strand 3	B	224	225	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	91	94	first strand
Strand 2	C	153	156	anti-parallel
Strand 3	C	120	123	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	117	123	first strand
Strand 2	D	153	158	anti-parallel
Strand 3	D	91	94	anti-parallel
Strand 4	D	181	183	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8TZK

Analysis of interatomic Contacts of Structural Units in PDB entry:
8TZK