Analysis of interatomic Contacts of Structural Units in PDB entry:
8TZO

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8TZO entry

There are 3 chains in PDB entry 8TZO (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ILE 37	LYS 349
B	GLY 3	ASN 498
C	GLU 18	LYS 377

There are 28 helices in PDB entry 8TZO. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	45	55	Right-handed alpha
Helix 2	AA2	A	55	77	Right-handed alpha
Helix 3	AA3	A	101	125	Right-handed alpha
Helix 4	AA4	A	147	151	Right-handed alpha
Helix 5	AA5	A	154	168	Right-handed alpha
Helix 6	AA6	A	169	171	Right-handed 310
Helix 7	AA7	A	175	195	Right-handed alpha
Helix 8	AA8	A	220	233	Right-handed alpha
Helix 9	AA9	A	303	308	Right-handed alpha
Helix 10	AB1	B	10	35	Right-handed alpha
Helix 11	AB2	B	76	81	Right-handed 310
Helix 12	AB3	B	169	173	Right-handed 310
Helix 13	AB4	B	227	258	Right-handed alpha
Helix 14	AB5	B	264	282	Right-handed alpha
Helix 15	AB6	B	283	288	Right-handed 310
Helix 16	AB7	B	295	322	Right-handed alpha
Helix 17	AB8	B	331	334	Right-handed 310
Helix 18	AB9	B	335	361	Right-handed alpha
Helix 19	AC1	B	367	370	Right-handed 310
Helix 20	AC2	B	371	412	Right-handed alpha
Helix 21	AC3	B	413	417	Right-handed 310
Helix 22	AC4	B	418	456	Right-handed alpha
Helix 23	AC5	B	469	492	Right-handed alpha
Helix 24	AC6	C	31	36	Right-handed alpha
Helix 25	AC7	C	118	122	Right-handed 310
Helix 26	AC8	C	196	200	Right-handed alpha
Helix 27	AC9	C	302	307	Right-handed 310
Helix 28	AD1	C	335	377	Right-handed alpha

There are 11 sheets in PDB entry 8TZO. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	197	202	first strand
Strand 2	A	212	217	anti-parallel

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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	251	254	first strand
Strand 2	A	236	241	anti-parallel
Strand 3	A	269	270	parallel

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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	293	294	first strand
Strand 2	A	346	347	anti-parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	323	324	first strand
Strand 2	A	337	338	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	40	46	first strand
Strand 2	B	215	226	anti-parallel
Strand 3	B	110	119	anti-parallel
Strand 4	B	182	187	anti-parallel

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There are 6 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	73	74	first strand
Strand 2	B	48	51	anti-parallel
Strand 3	B	90	95	anti-parallel
Strand 4	B	194	200	anti-parallel
Strand 5	B	131	141	anti-parallel
Strand 6	B	149	159	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	459	462	first strand
Strand 2	B	465	468	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	21	25	first strand
Strand 2	C	325	333	anti-parallel
Strand 3	C	65	68	anti-parallel
Strand 4	C	49	52	anti-parallel

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There are 6 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	21	25	first strand
Strand 2	C	325	333	anti-parallel
Strand 3	C	91	99	anti-parallel
Strand 4	C	170	176	anti-parallel
Strand 5	C	181	186	anti-parallel
Strand 6	C	189	195	anti-parallel

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There are 7 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	37	39	first strand
Strand 2	C	73	84	anti-parallel
Strand 3	C	311	320	anti-parallel
Strand 4	C	105	107	anti-parallel
Strand 5	C	130	137	anti-parallel
Strand 6	C	144	150	anti-parallel
Strand 7	C	153	155	anti-parallel

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There are 7 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	37	39	first strand
Strand 2	C	73	84	anti-parallel
Strand 3	C	311	320	anti-parallel
Strand 4	C	110	113	anti-parallel
Strand 5	C	130	137	anti-parallel
Strand 6	C	144	150	anti-parallel
Strand 7	C	153	155	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8TZO

Analysis of interatomic Contacts of Structural Units in PDB entry:
8TZO