Analysis of interatomic Contacts of Structural Units in PDB entry:
8TZS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8TZS entry

There is 1 chain in PDB entry 8TZS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 3ASN 498
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 8TZS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
4 9Right-handed alpha
Helix 2
AA2
A
10 36Right-handed alpha
Helix 3
AA3
A
121 125Right-handed 310
Helix 4
AA4
A
169 173Right-handed 310
Helix 5
AA5
A
227 258Right-handed alpha
Helix 6
AA6
A
264 282Right-handed alpha
Helix 7
AA7
A
283 285Right-handed 310
Helix 8
AA8
A
286 291Right-handed alpha
Helix 9
AA9
A
295 322Right-handed alpha
Helix 10
AB1
A
331 334Right-handed 310
Helix 11
AB2
A
335 360Right-handed alpha
Helix 12
AB3
A
372 413Right-handed alpha
Helix 13
AB4
A
420 456Right-handed alpha
Helix 14
AB5
A
473 493Right-handed alpha
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There are 2 sheets in PDB entry 8TZS. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 46first strand
Strand 2
A
215 226anti-parallel
Strand 3
A
110 119anti-parallel
Strand 4
A
182 187anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
48 51first strand
Strand 2
A
90 95anti-parallel
Strand 3
A
194 200anti-parallel
Strand 4
A
134 141anti-parallel
Strand 5
A
149 156anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il