Analysis of interatomic Contacts of Structural Units in PDB entry:
8TZV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8TZV entry

There are 2 chains in PDB entry 8TZV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 7ASN 518
B
 GLY 7ASN 518
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 8TZV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
43 52Right-handed alpha
Helix 2
AA2
A
87 102Right-handed alpha
Helix 3
AA3
A
281 287Right-handed alpha
Helix 4
AA4
A
287 302Right-handed alpha
Helix 5
AA5
A
306 310Right-handed 310
Helix 6
AA6
A
311 320Right-handed alpha
Helix 7
AA7
A
372 375Right-handed 310
Helix 8
AA8
A
378 396Right-handed alpha
Helix 9
AA9
A
416 422Right-handed 310
Helix 10
AB1
A
438 448Right-handed alpha
Helix 11
AB2
A
467 470Right-handed 310
Helix 12
AB3
A
482 487Right-handed alpha
Helix 13
AB4
A
491 511Right-handed alpha
Helix 14
AB5
B
43 53Right-handed alpha
Helix 15
AB6
B
81 84Right-handed 310
Helix 16
AB7
B
87 104Right-handed alpha
Helix 17
AB8
B
281 287Right-handed alpha
Helix 18
AB9
B
287 302Right-handed alpha
Helix 19
AC1
B
306 310Right-handed 310
Helix 20
AC2
B
311 320Right-handed alpha
Helix 21
AC3
B
372 377Right-handed 310
Helix 22
AC4
B
378 398Right-handed alpha
Helix 23
AC5
B
417 422Right-handed 310
Helix 24
AC6
B
441 446Right-handed alpha
Helix 25
AC7
B
467 470Right-handed 310
Helix 26
AC8
B
482 489Right-handed alpha
Helix 27
AC9
B
494 512Right-handed alpha
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There are 6 sheets in PDB entry 8TZV. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
56 57first strand
Strand 2
A
61 65anti-parallel
Strand 3
A
34 41anti-parallel
Strand 4
A
10 15anti-parallel
Strand 5
A
513 515parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
404 405first strand
Strand 2
A
77 79anti-parallel
Strand 3
A
425 428anti-parallel
Strand 4
A
435 437anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
270 276first strand
Strand 2
A
338 346anti-parallel
Strand 3
A
349 358anti-parallel
Strand 4
A
363 370anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
472 474first strand
Strand 2
A
479 481anti-parallel
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There are 7 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
56 57first strand
Strand 2
B
61 65anti-parallel
Strand 3
B
34 41anti-parallel
Strand 4
B
10 15anti-parallel
Strand 5
B
513 515parallel
Strand 6
B
472 474parallel
Strand 7
B
479 481anti-parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
270 276first strand
Strand 2
B
338 346anti-parallel
Strand 3
B
349 358anti-parallel
Strand 4
B
362 370anti-parallel
Strand 5
B
403 409parallel
Strand 6
B
75 79anti-parallel
Strand 7
B
425 428anti-parallel
Strand 8
B
435 437anti-parallel
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