Analysis of interatomic Contacts of Structural Units in PDB entry:
8U1G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8U1G entry

There are 2 chains in PDB entry 8U1G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 704PRO 1140
B
 ASN 703PRO 1140
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 8U1G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
738 741Right-handed 310
Helix 2
AA2
A
759 783Right-handed alpha
Helix 3
AA3
A
796 800Right-handed 310
Helix 4
AA4
A
816 826Right-handed alpha
Helix 5
AA5
A
832 841Right-handed alpha
Helix 6
AA6
A
847 855Right-handed alpha
Helix 7
AA7
A
866 883Right-handed alpha
Helix 8
AA8
A
897 910Right-handed alpha
Helix 9
AA9
A
913 918Right-handed alpha
Helix 10
AB1
A
919 941Right-handed alpha
Helix 11
AB2
A
942 944Right-handed 310
Helix 12
AB3
A
945 968Right-handed alpha
Helix 13
AB4
A
969 971Right-handed 310
Helix 14
AB5
A
990 1033Right-handed alpha
Helix 15
AB6
B
761 783Right-handed alpha
Helix 16
AB7
B
818 826Right-handed alpha
Helix 17
AB8
B
832 842Right-handed alpha
Helix 18
AB9
B
849 854Right-handed alpha
Helix 19
AC1
B
866 883Right-handed alpha
Helix 20
AC2
B
897 910Right-handed alpha
Helix 21
AC3
B
913 918Right-handed alpha
Helix 22
AC4
B
919 941Right-handed alpha
Helix 23
AC5
B
941 966Right-handed alpha
Helix 24
AC6
B
985 1033Right-handed alpha
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There are 8 sheets in PDB entry 8U1G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
711 728first strand
Strand 2
A
1059 1078anti-parallel
Strand 3
A
1047 1056anti-parallel
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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
711 728first strand
Strand 2
A
1059 1078anti-parallel
Strand 3
A
1094 1097anti-parallel
Strand 4
A
1102 1105anti-parallel
Strand 5
A
1112 1113anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
734 736first strand
Strand 2
A
858 860anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1120 1125first strand
Strand 2
A
1086 1090anti-parallel
Strand 3
A
1081 1083anti-parallel
Strand 4
A
1133 1134parallel
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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
711 728first strand
Strand 2
B
1059 1078anti-parallel
Strand 3
B
1047 1056anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
711 728first strand
Strand 2
B
1059 1078anti-parallel
Strand 3
B
1094 1098anti-parallel
Strand 4
B
1101 1105anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
734 736first strand
Strand 2
B
858 860anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1120 1125first strand
Strand 2
B
1086 1090anti-parallel
Strand 3
B
1081 1083anti-parallel
Strand 4
B
1133 1134parallel
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