Analysis of interatomic Contacts of Structural Units in PDB entry:
8U1X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8U1X entry

There are 3 chains in PDB entry 8U1X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 11ALA 589
B
 ASN 61ALA 601
C
 ASP 2LEU 309
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 93 helices in PDB entry 8U1X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
12 20Right-handed alpha
Helix 2
AA2
A
24 34Right-handed alpha
Helix 3
AA3
A
34 42Right-handed alpha
Helix 4
AA4
A
45 50Right-handed alpha
Helix 5
AA5
A
50 58Right-handed alpha
Helix 6
AA6
A
62 73Right-handed alpha
Helix 7
AA7
A
85 88Right-handed 310
Helix 8
AA8
A
89 97Right-handed alpha
Helix 9
AA9
A
101 117Right-handed alpha
Helix 10
AB1
A
120 125Right-handed alpha
Helix 11
AB2
A
128 136Right-handed alpha
Helix 12
AB3
A
140 147Right-handed alpha
Helix 13
AB4
A
148 151Right-handed 310
Helix 14
AB5
A
159 175Right-handed alpha
Helix 15
AB6
A
178 188Right-handed alpha
Helix 16
AB7
A
188 194Right-handed alpha
Helix 17
AB8
A
197 202Right-handed alpha
Helix 18
AB9
A
204 213Right-handed alpha
Helix 19
AC1
A
217 233Right-handed alpha
Helix 20
AC2
A
234 235Right-handed 310
Helix 21
AC3
A
236 238Right-handed 310
Helix 22
AC4
A
239 244Right-handed alpha
Helix 23
AC5
A
244 253Right-handed alpha
Helix 24
AC6
A
256 266Right-handed alpha
Helix 25
AC7
A
266 275Right-handed alpha
Helix 26
AC8
A
275 282Right-handed alpha
Helix 27
AC9
A
282 292Right-handed alpha
Helix 28
AD1
A
295 305Right-handed alpha
Helix 29
AD2
A
305 312Right-handed alpha
Helix 30
AD3
A
317 325Right-handed alpha
Helix 31
AD4
A
326 334Right-handed alpha
Helix 32
AD5
A
338 347Right-handed alpha
Helix 33
AD6
A
348 351Right-handed 310
Helix 34
AD7
A
352 357Right-handed alpha
Helix 35
AD8
A
357 364Right-handed alpha
Helix 36
AD9
A
365 374Right-handed alpha
Helix 37
AE1
A
377 386Right-handed alpha
Helix 38
AE2
A
387 393Right-handed alpha
Helix 39
AE3
A
396 404Right-handed alpha
Helix 40
AE4
A
404 411Right-handed alpha
Helix 41
AE5
A
412 414Right-handed 310
Helix 42
AE6
A
416 435Right-handed alpha
Helix 43
AE7
A
435 443Right-handed alpha
Helix 44
AE8
A
443 450Right-handed alpha
Helix 45
AE9
A
455 474Right-handed alpha
Helix 46
AF1
A
474 481Right-handed alpha
Helix 47
AF2
A
482 488Right-handed alpha
Helix 48
AF3
A
489 492Right-handed 310
Helix 49
AF4
A
494 520Right-handed alpha
Helix 50
AF5
A
521 528Right-handed alpha
Helix 51
AF6
A
529 531Right-handed 310
Helix 52
AF7
A
533 547Right-handed alpha
Helix 53
AF8
A
552 559Right-handed alpha
Helix 54
AF9
A
560 568Right-handed alpha
Helix 55
AG1
A
572 586Right-handed alpha
Helix 56
AG2
B
114 124Right-handed alpha
Helix 57
AG3
B
138 159Right-handed alpha
Helix 58
AG4
B
167 179Right-handed alpha
Helix 59
AG5
B
195 199Right-handed 310
Helix 60
AG6
B
206 222Right-handed alpha
Helix 61
AG7
B
227 232Right-handed alpha
Helix 62
AG8
B
236 245Right-handed alpha
Helix 63
AG9
B
246 249Right-handed 310
Helix 64
AH1
B
251 269Right-handed alpha
Helix 65
AH2
B
272 290Right-handed alpha
Helix 66
AH3
B
296 309Right-handed alpha
Helix 67
AH4
B
316 326Right-handed alpha
Helix 68
AH5
B
327 333Right-handed 310
Helix 69
AH6
B
335 354Right-handed alpha
Helix 70
AH7
B
357 366Right-handed alpha
Helix 71
AH8
B
373 390Right-handed alpha
Helix 72
AH9
B
392 397Right-handed alpha
Helix 73
AI1
B
399 412Right-handed alpha
Helix 74
AI2
B
415 423Right-handed alpha
Helix 75
AI3
B
424 427Right-handed 310
Helix 76
AI4
B
428 437Right-handed alpha
Helix 77
AI5
B
438 452Right-handed alpha
Helix 78
AI6
B
460 475Right-handed alpha
Helix 79
AI7
B
496 505Right-handed alpha
Helix 80
AI8
B
506 509Right-handed 310
Helix 81
AI9
B
578 588Right-handed alpha
Helix 82
AJ1
C
3 18Right-handed alpha
Helix 83
AJ2
C
24 40Right-handed alpha
Helix 84
AJ3
C
61 73Right-handed alpha
Helix 85
AJ4
C
92 107Right-handed alpha
Helix 86
AJ5
C
122 127Right-handed alpha
Helix 87
AJ6
C
129 138Right-handed alpha
Helix 88
AJ7
C
140 150Right-handed alpha
Helix 89
AJ8
C
151 153Right-handed 310
Helix 90
AJ9
C
176 182Right-handed alpha
Helix 91
AK1
C
193 198Right-handed alpha
Helix 92
AK2
C
221 233Right-handed alpha
Helix 93
AK3
C
264 268Right-handed 310
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There are 3 sheets in PDB entry 8U1X. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
45 48first strand
Strand 2
C
156 159parallel
Strand 3
C
163 166anti-parallel
Strand 4
C
236 239parallel
Strand 5
C
256 259parallel
Strand 6
C
248 251anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
80 81first strand
Strand 2
C
52 54parallel
Strand 3
C
273 278anti-parallel
Strand 4
C
284 289anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
202 203first strand
Strand 2
C
218 220parallel
Strand 3
C
210 211anti-parallel
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