Analysis of interatomic Contacts of Structural Units in PDB entry:
8U2R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8U2R entry

There is 1 chain in PDB entry 8U2R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 40SER 703
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 8U2R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
47 54Right-handed alpha
Helix 2
AA2
A
59 73Right-handed alpha
Helix 3
AA3
A
73 86Right-handed alpha
Helix 4
AA4
A
104 108Right-handed 310
Helix 5
AA5
A
121 127Right-handed alpha
Helix 6
AA6
A
128 131Right-handed 310
Helix 7
AA7
A
155 172Right-handed alpha
Helix 8
AA8
A
188 202Right-handed alpha
Helix 9
AA9
A
213 225Right-handed alpha
Helix 10
AB1
A
243 258Right-handed alpha
Helix 11
AB2
A
285 291Right-handed alpha
Helix 12
AB3
A
292 298Right-handed 310
Helix 13
AB4
A
330 346Right-handed alpha
Helix 14
AB5
A
361 368Right-handed alpha
Helix 15
AB6
A
369 375Right-handed alpha
Helix 16
AB7
A
392 402Right-handed alpha
Helix 17
AB8
A
409 420Right-handed alpha
Helix 18
AB9
A
420 426Right-handed alpha
Helix 19
AC1
A
443 453Right-handed alpha
Helix 20
AC2
A
467 471Right-handed 310
Helix 21
AC3
A
533 542Right-handed alpha
Helix 22
AC4
A
581 590Right-handed alpha
Helix 23
AC5
A
624 639Right-handed alpha
Helix 24
AC6
A
640 644Right-handed 310
Helix 25
AC7
A
664 673Right-handed alpha
Helix 26
AC8
A
689 702Right-handed alpha
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There are 8 sheets in PDB entry 8U2R. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
99 102first strand
Strand 2
A
111 114anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
119 120first strand
Strand 2
A
305 306anti-parallel
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There are 7 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
150 154first strand
Strand 2
A
138 143anti-parallel
Strand 3
A
378 382parallel
Strand 4
A
352 355parallel
Strand 5
A
405 408parallel
Strand 6
A
434 438parallel
Strand 7
A
460 464parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
282 284first strand
Strand 2
A
263 267parallel
Strand 3
A
228 232parallel
Strand 4
A
180 184parallel
Strand 5
A
204 207parallel
Strand 6
A
310 316parallel
Strand 7
A
324 329anti-parallel
Strand 8
A
529 530anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
235 237first strand
Strand 2
A
240 242anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
498 501first strand
Strand 2
A
513 519anti-parallel
Strand 3
A
548 556anti-parallel
Strand 4
A
562 567anti-parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
571 574first strand
Strand 2
A
577 580anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
594 604first strand
Strand 2
A
608 617anti-parallel
Strand 3
A
647 650parallel
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