Analysis of interatomic Contacts of Structural Units in PDB entry:
8U37


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8U37 entry


Note, this PDB entry contains modified residue(s) PHOSPHOTHREONINE (TPO) . This residue is treated as heterogroup (ligand) both in the PDB entry and in LPC/CSU analysis.

There are 3 chains in PDB entry 8U37 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 332ARG 496
A
 PHE 498LEU 637
A
 PRO 639PRO 666
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 8U37. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
335 337Right-handed 310
Helix 2
AA2
A
372 379Right-handed alpha
Helix 3
AA3
A
380 393Right-handed alpha
Helix 4
AA4
A
424 431Right-handed alpha
Helix 5
AA5
A
436 457Right-handed alpha
Helix 6
AA6
A
501 505Right-handed 310
Helix 7
AA7
A
506 511Right-handed alpha
Helix 8
AA8
A
517 534Right-handed alpha
Helix 9
AA9
A
542 553Right-handed alpha
Helix 10
AB1
A
562 573Right-handed alpha
Helix 11
AB2
A
576 580Right-handed 310
Helix 12
AB3
A
586 593Right-handed alpha
Helix 13
AB4
A
594 598Right-handed 310
Helix 14
AB5
A
601 607Right-handed alpha
Helix 15
AB6
A
641 646Right-handed alpha
Helix 16
AB7
A
647 648Right-handed 310
Helix 17
AB8
A
649 654Right-handed 310
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There are 2 sheets in PDB entry 8U37. Click on sheet of interest to get list of strands forming it: AA1, AA2,

There are 6 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
339 348first strand
Strand 2
A
351 358anti-parallel
Strand 3
A
364 371anti-parallel
Strand 4
A
412 418anti-parallel
Strand 5
A
403 408anti-parallel
Strand 6
A
658 659anti-parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
469 471first strand
Strand 2
A
477 479anti-parallel
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