Analysis of interatomic Contacts of Structural Units in PDB entry:
8U3D


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8U3D entry

There is 1 chain in PDB entry 8U3D (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 CYS 36ASN 488
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 8U3D. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
37 68Right-handed alpha
Helix 2
AA2
A
104 120Right-handed alpha
Helix 3
AA3
A
123 134Right-handed alpha
Helix 4
AA4
A
134 151Right-handed alpha
Helix 5
AA5
A
152 160Right-handed alpha
Helix 6
AA6
A
160 177Right-handed alpha
Helix 7
AA7
A
177 190Right-handed alpha
Helix 8
AA8
A
191 193Right-handed 310
Helix 9
AA9
A
194 224Right-handed alpha
Helix 10
AB1
A
226 248Right-handed alpha
Helix 11
AB2
A
259 271Right-handed alpha
Helix 12
AB3
A
288 319Right-handed alpha
Helix 13
AB4
A
323 356Right-handed alpha
Helix 14
AB5
A
361 385Right-handed alpha
Helix 15
AB6
A
388 403Right-handed alpha
Helix 16
AB7
A
404 408Right-handed 310
Helix 17
AB8
A
409 412Right-handed 310
Helix 18
AB9
A
413 418Right-handed alpha
Helix 19
AC1
A
421 434Right-handed alpha
Helix 20
AC2
A
434 448Right-handed alpha
Helix 21
AC3
A
452 478Right-handed alpha
Helix 22
AC4
A
483 487Right-handed 310
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There are no sheets in PDB entry 8U3D
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