Analysis of interatomic Contacts of Structural Units in PDB entry:
8U3J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8U3J entry

There are 4 chains in PDB entry 8U3J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 197TRP 752
D
 SER 197TRP 752
B
 SER 197TRP 752
C
 SER 197TRP 752
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 92 helices in PDB entry 8U3J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
203 211Right-handed alpha
Helix 2
AA2
A
213 223Right-handed alpha
Helix 3
AA3
A
233 237Right-handed 310
Helix 4
AA4
A
250 257Right-handed alpha
Helix 5
AA5
A
261 269Right-handed alpha
Helix 6
AA6
A
286 295Right-handed alpha
Helix 7
AA7
A
298 320Right-handed alpha
Helix 8
AA8
A
335 343Right-handed alpha
Helix 9
AA9
A
345 354Right-handed alpha
Helix 10
AB1
A
362 366Right-handed 310
Helix 11
AB2
A
394 402Right-handed alpha
Helix 12
AB3
A
409 414Right-handed 310
Helix 13
AB4
A
415 454Right-handed alpha
Helix 14
AB5
A
468 500Right-handed alpha
Helix 15
AB6
A
504 509Right-handed alpha
Helix 16
AB7
A
512 531Right-handed alpha
Helix 17
AB8
A
536 551Right-handed alpha
Helix 18
AB9
A
552 557Right-handed 310
Helix 19
AC1
A
559 599Right-handed alpha
Helix 20
AC2
A
630 640Right-handed alpha
Helix 21
AC3
A
641 643Right-handed 310
Helix 22
AC4
A
655 684Right-handed alpha
Helix 23
AC5
A
689 711Right-handed alpha
Helix 24
AC6
D
203 211Right-handed alpha
Helix 25
AC7
D
213 223Right-handed alpha
Helix 26
AC8
D
233 237Right-handed 310
Helix 27
AC9
D
250 257Right-handed alpha
Helix 28
AD1
D
261 269Right-handed alpha
Helix 29
AD2
D
286 295Right-handed alpha
Helix 30
AD3
D
298 320Right-handed alpha
Helix 31
AD4
D
335 343Right-handed alpha
Helix 32
AD5
D
345 354Right-handed alpha
Helix 33
AD6
D
362 366Right-handed 310
Helix 34
AD7
D
394 402Right-handed alpha
Helix 35
AD8
D
409 414Right-handed 310
Helix 36
AD9
D
415 454Right-handed alpha
Helix 37
AE1
D
468 500Right-handed alpha
Helix 38
AE2
D
504 509Right-handed alpha
Helix 39
AE3
D
512 531Right-handed alpha
Helix 40
AE4
D
536 551Right-handed alpha
Helix 41
AE5
D
552 557Right-handed 310
Helix 42
AE6
D
559 599Right-handed alpha
Helix 43
AE7
D
630 640Right-handed alpha
Helix 44
AE8
D
641 643Right-handed 310
Helix 45
AE9
D
655 684Right-handed alpha
Helix 46
AF1
D
689 711Right-handed alpha
Helix 47
AF2
B
203 211Right-handed alpha
Helix 48
AF3
B
213 223Right-handed alpha
Helix 49
AF4
B
233 237Right-handed 310
Helix 50
AF5
B
250 257Right-handed alpha
Helix 51
AF6
B
261 269Right-handed alpha
Helix 52
AF7
B
286 295Right-handed alpha
Helix 53
AF8
B
298 320Right-handed alpha
Helix 54
AF9
B
335 343Right-handed alpha
Helix 55
AG1
B
345 354Right-handed alpha
Helix 56
AG2
B
362 366Right-handed 310
Helix 57
AG3
B
394 402Right-handed alpha
Helix 58
AG4
B
409 414Right-handed 310
Helix 59
AG5
B
415 454Right-handed alpha
Helix 60
AG6
B
468 500Right-handed alpha
Helix 61
AG7
B
504 509Right-handed alpha
Helix 62
AG8
B
512 531Right-handed alpha
Helix 63
AG9
B
536 551Right-handed alpha
Helix 64
AH1
B
552 557Right-handed 310
Helix 65
AH2
B
559 599Right-handed alpha
Helix 66
AH3
B
630 640Right-handed alpha
Helix 67
AH4
B
641 643Right-handed 310
Helix 68
AH5
B
655 684Right-handed alpha
Helix 69
AH6
B
689 711Right-handed alpha
Helix 70
AH7
C
203 211Right-handed alpha
Helix 71
AH8
C
213 223Right-handed alpha
Helix 72
AH9
C
233 237Right-handed 310
Helix 73
AI1
C
250 257Right-handed alpha
Helix 74
AI2
C
261 269Right-handed alpha
Helix 75
AI3
C
286 295Right-handed alpha
Helix 76
AI4
C
298 320Right-handed alpha
Helix 77
AI5
C
335 343Right-handed alpha
Helix 78
AI6
C
345 354Right-handed alpha
Helix 79
AI7
C
362 366Right-handed 310
Helix 80
AI8
C
394 402Right-handed alpha
Helix 81
AI9
C
409 414Right-handed 310
Helix 82
AJ1
C
415 454Right-handed alpha
Helix 83
AJ2
C
468 500Right-handed alpha
Helix 84
AJ3
C
504 509Right-handed alpha
Helix 85
AJ4
C
512 531Right-handed alpha
Helix 86
AJ5
C
536 551Right-handed alpha
Helix 87
AJ6
C
552 557Right-handed 310
Helix 88
AJ7
C
559 599Right-handed alpha
Helix 89
AJ8
C
630 640Right-handed alpha
Helix 90
AJ9
C
641 643Right-handed 310
Helix 91
AK1
C
655 684Right-handed alpha
Helix 92
AK2
C
689 711Right-handed alpha
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There are 4 sheets in PDB entry 8U3J. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
368 374first strand
Strand 2
A
377 382anti-parallel
Strand 3
A
744 747anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
368 374first strand
Strand 2
D
377 382anti-parallel
Strand 3
D
744 747anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
368 374first strand
Strand 2
B
377 382anti-parallel
Strand 3
B
744 747anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
368 374first strand
Strand 2
C
377 382anti-parallel
Strand 3
C
744 747anti-parallel
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