Analysis of interatomic Contacts of Structural Units in PDB entry:
8U5C


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8U5C entry

There are 2 chains in PDB entry 8U5C (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
E
 PRO 34LEU 717
F
 PRO 34LEU 717
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 8U5C. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
E
38 40Right-handed 310
Helix 2
AA2
E
41 62Right-handed alpha
Helix 3
AA3
E
66 80Right-handed alpha
Helix 4
AA4
E
80 93Right-handed alpha
Helix 5
AA5
E
94 98Right-handed 310
Helix 6
AA6
E
99 125Right-handed alpha
Helix 7
AA7
E
129 143Right-handed alpha
Helix 8
AA8
E
149 159Right-handed alpha
Helix 9
AA9
E
162 165Right-handed 310
Helix 10
AB1
E
166 196Right-handed alpha
Helix 11
AB2
E
202 216Right-handed alpha
Helix 12
AB3
E
217 234Right-handed alpha
Helix 13
AB4
E
238 264Right-handed alpha
Helix 14
AB5
E
272 288Right-handed alpha
Helix 15
AB6
E
288 302Right-handed alpha
Helix 16
AB7
E
306 323Right-handed alpha
Helix 17
AB8
E
326 337Right-handed alpha
Helix 18
AB9
E
339 367Right-handed alpha
Helix 19
AC1
E
368 370Right-handed 310
Helix 20
AC2
E
371 404Right-handed alpha
Helix 21
AC3
E
405 409Right-handed 310
Helix 22
AC4
E
411 436Right-handed alpha
Helix 23
AC5
E
439 473Right-handed alpha
Helix 24
AC6
E
480 503Right-handed alpha
Helix 25
AC7
E
511 515Right-handed 310
Helix 26
AC8
E
516 544Right-handed alpha
Helix 27
AC9
E
655 682Right-handed alpha
Helix 28
AD1
E
687 703Right-handed alpha
Helix 29
AD2
E
703 712Right-handed alpha
Helix 30
AD3
F
38 40Right-handed 310
Helix 31
AD4
F
41 62Right-handed alpha
Helix 32
AD5
F
66 80Right-handed alpha
Helix 33
AD6
F
80 93Right-handed alpha
Helix 34
AD7
F
94 98Right-handed 310
Helix 35
AD8
F
99 125Right-handed alpha
Helix 36
AD9
F
129 143Right-handed alpha
Helix 37
AE1
F
149 159Right-handed alpha
Helix 38
AE2
F
162 165Right-handed 310
Helix 39
AE3
F
166 196Right-handed alpha
Helix 40
AE4
F
202 216Right-handed alpha
Helix 41
AE5
F
217 234Right-handed alpha
Helix 42
AE6
F
238 265Right-handed alpha
Helix 43
AE7
F
272 288Right-handed alpha
Helix 44
AE8
F
288 302Right-handed alpha
Helix 45
AE9
F
306 322Right-handed alpha
Helix 46
AF1
F
326 337Right-handed alpha
Helix 47
AF2
F
339 367Right-handed alpha
Helix 48
AF3
F
368 370Right-handed 310
Helix 49
AF4
F
371 404Right-handed alpha
Helix 50
AF5
F
405 409Right-handed 310
Helix 51
AF6
F
411 436Right-handed alpha
Helix 52
AF7
F
439 473Right-handed alpha
Helix 53
AF8
F
480 503Right-handed alpha
Helix 54
AF9
F
511 515Right-handed 310
Helix 55
AG1
F
516 544Right-handed alpha
Helix 56
AG2
F
655 682Right-handed alpha
Helix 57
AG3
F
687 703Right-handed alpha
Helix 58
AG4
F
703 712Right-handed alpha
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There are no sheets in PDB entry 8U5C
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il