Analysis of interatomic Contacts of Structural Units in PDB entry:
8U5N


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8U5N entry

There is 1 chain in PDB entry 8U5N (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 35ASP 714
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 8U5N. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
38 40Right-handed 310
Helix 2
AA2
A
41 62Right-handed alpha
Helix 3
AA3
A
66 80Right-handed alpha
Helix 4
AA4
A
80 93Right-handed alpha
Helix 5
AA5
A
94 98Right-handed 310
Helix 6
AA6
A
99 125Right-handed alpha
Helix 7
AA7
A
129 143Right-handed alpha
Helix 8
AA8
A
149 159Right-handed alpha
Helix 9
AA9
A
164 196Right-handed alpha
Helix 10
AB1
A
202 217Right-handed alpha
Helix 11
AB2
A
217 234Right-handed alpha
Helix 12
AB3
A
238 251Right-handed alpha
Helix 13
AB4
A
251 264Right-handed alpha
Helix 14
AB5
A
272 288Right-handed alpha
Helix 15
AB6
A
288 302Right-handed alpha
Helix 16
AB7
A
306 322Right-handed alpha
Helix 17
AB8
A
326 336Right-handed alpha
Helix 18
AB9
A
339 367Right-handed alpha
Helix 19
AC1
A
368 370Right-handed 310
Helix 20
AC2
A
371 404Right-handed alpha
Helix 21
AC3
A
405 408Right-handed 310
Helix 22
AC4
A
409 436Right-handed alpha
Helix 23
AC5
A
439 473Right-handed alpha
Helix 24
AC6
A
480 503Right-handed alpha
Helix 25
AC7
A
511 515Right-handed 310
Helix 26
AC8
A
516 547Right-handed alpha
Helix 27
AC9
A
654 682Right-handed alpha
Helix 28
AD1
A
687 712Right-handed alpha
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There are no sheets in PDB entry 8U5N
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il