Analysis of interatomic Contacts of Structural Units in PDB entry:
8U5X


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8U5X entry

There is 1 chain in PDB entry 8U5X (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 35GLY 712
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 8U5X. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
38 40Right-handed 310
Helix 2
AA2
A
41 62Right-handed alpha
Helix 3
AA3
A
66 80Right-handed alpha
Helix 4
AA4
A
80 93Right-handed alpha
Helix 5
AA5
A
94 98Right-handed 310
Helix 6
AA6
A
99 125Right-handed alpha
Helix 7
AA7
A
126 128Right-handed 310
Helix 8
AA8
A
129 143Right-handed alpha
Helix 9
AA9
A
149 159Right-handed alpha
Helix 10
AB1
A
162 165Right-handed 310
Helix 11
AB2
A
166 196Right-handed alpha
Helix 12
AB3
A
202 216Right-handed alpha
Helix 13
AB4
A
217 234Right-handed alpha
Helix 14
AB5
A
238 251Right-handed alpha
Helix 15
AB6
A
251 265Right-handed alpha
Helix 16
AB7
A
272 288Right-handed alpha
Helix 17
AB8
A
288 302Right-handed alpha
Helix 18
AB9
A
306 322Right-handed alpha
Helix 19
AC1
A
326 337Right-handed alpha
Helix 20
AC2
A
339 367Right-handed alpha
Helix 21
AC3
A
368 370Right-handed 310
Helix 22
AC4
A
371 404Right-handed alpha
Helix 23
AC5
A
405 409Right-handed 310
Helix 24
AC6
A
411 436Right-handed alpha
Helix 25
AC7
A
439 474Right-handed alpha
Helix 26
AC8
A
480 503Right-handed alpha
Helix 27
AC9
A
511 515Right-handed 310
Helix 28
AD1
A
516 544Right-handed alpha
Helix 29
AD2
A
655 683Right-handed alpha
Helix 30
AD3
A
686 711Right-handed alpha
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There are no sheets in PDB entry 8U5X
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il