Analysis of interatomic Contacts of Structural Units in PDB entry:
8U71


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8U71 entry

There are 2 chains in PDB entry 8U71 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 76ALA 1192
B
 LYS 76ALA 1192
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 84 helices in PDB entry 8U71. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
77 95Right-handed alpha
Helix 2
AA2
A
102 120Right-handed alpha
Helix 3
AA3
A
120 132Right-handed alpha
Helix 4
AA4
A
134 154Right-handed alpha
Helix 5
AA5
A
156 162Right-handed alpha
Helix 6
AA6
A
162 190Right-handed alpha
Helix 7
AA7
A
194 205Right-handed alpha
Helix 8
AA8
A
210 221Right-handed alpha
Helix 9
AA9
A
223 254Right-handed alpha
Helix 10
AB1
A
260 291Right-handed alpha
Helix 11
AB2
A
297 319Right-handed alpha
Helix 12
AB3
A
321 337Right-handed alpha
Helix 13
AB4
A
338 341Right-handed 310
Helix 14
AB5
A
342 375Right-handed alpha
Helix 15
AB6
A
381 412Right-handed alpha
Helix 16
AB7
A
418 428Right-handed alpha
Helix 17
AB8
A
432 447Right-handed alpha
Helix 18
AB9
A
449 481Right-handed alpha
Helix 19
AC1
A
482 485Right-handed 310
Helix 20
AC2
A
487 513Right-handed alpha
Helix 21
AC3
A
514 515Right-handed 310
Helix 22
AC4
A
516 521Right-handed 310
Helix 23
AC5
A
522 530Right-handed alpha
Helix 24
AC6
A
571 601Right-handed alpha
Helix 25
AC7
A
604 621Right-handed alpha
Helix 26
AC8
A
628 636Right-handed alpha
Helix 27
AC9
A
640 653Right-handed alpha
Helix 28
AD1
A
677 699Right-handed alpha
Helix 29
AD2
A
732 756Right-handed alpha
Helix 30
AD3
A
762 776Right-handed alpha
Helix 31
AD4
A
799 806Right-handed alpha
Helix 32
AD5
A
807 812Right-handed 310
Helix 33
AD6
A
813 856Right-handed alpha
Helix 34
AD7
A
860 889Right-handed alpha
Helix 35
AD8
A
889 919Right-handed alpha
Helix 36
AD9
A
923 944Right-handed alpha
Helix 37
AE1
A
952 959Right-handed alpha
Helix 38
AE2
A
966 977Right-handed alpha
Helix 39
AE3
A
1044 1049Right-handed alpha
Helix 40
AE4
A
1070 1080Right-handed alpha
Helix 41
AE5
A
1085 1107Right-handed alpha
Helix 42
AE6
A
1113 1124Right-handed alpha
Helix 43
AE7
B
77 95Right-handed alpha
Helix 44
AE8
B
101 120Right-handed alpha
Helix 45
AE9
B
120 132Right-handed alpha
Helix 46
AF1
B
134 154Right-handed alpha
Helix 47
AF2
B
155 162Right-handed alpha
Helix 48
AF3
B
162 189Right-handed alpha
Helix 49
AF4
B
194 206Right-handed alpha
Helix 50
AF5
B
210 221Right-handed alpha
Helix 51
AF6
B
223 254Right-handed alpha
Helix 52
AF7
B
260 291Right-handed alpha
Helix 53
AF8
B
298 319Right-handed alpha
Helix 54
AF9
B
321 337Right-handed alpha
Helix 55
AG1
B
338 341Right-handed 310
Helix 56
AG2
B
342 375Right-handed alpha
Helix 57
AG3
B
381 412Right-handed alpha
Helix 58
AG4
B
418 428Right-handed alpha
Helix 59
AG5
B
432 447Right-handed alpha
Helix 60
AG6
B
449 481Right-handed alpha
Helix 61
AG7
B
482 485Right-handed 310
Helix 62
AG8
B
487 513Right-handed alpha
Helix 63
AG9
B
514 515Right-handed 310
Helix 64
AH1
B
516 521Right-handed 310
Helix 65
AH2
B
522 530Right-handed alpha
Helix 66
AH3
B
571 601Right-handed alpha
Helix 67
AH4
B
604 621Right-handed alpha
Helix 68
AH5
B
628 636Right-handed alpha
Helix 69
AH6
B
640 653Right-handed alpha
Helix 70
AH7
B
677 699Right-handed alpha
Helix 71
AH8
B
732 755Right-handed alpha
Helix 72
AH9
B
762 776Right-handed alpha
Helix 73
AI1
B
799 805Right-handed alpha
Helix 74
AI2
B
807 812Right-handed 310
Helix 75
AI3
B
813 855Right-handed alpha
Helix 76
AI4
B
860 889Right-handed alpha
Helix 77
AI5
B
889 919Right-handed alpha
Helix 78
AI6
B
923 944Right-handed alpha
Helix 79
AI7
B
952 959Right-handed alpha
Helix 80
AI8
B
966 977Right-handed alpha
Helix 81
AI9
B
1044 1049Right-handed alpha
Helix 82
AJ1
B
1070 1080Right-handed alpha
Helix 83
AJ2
B
1085 1107Right-handed alpha
Helix 84
AJ3
B
1113 1124Right-handed alpha
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There are 8 sheets in PDB entry 8U71. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
978 982first strand
Strand 2
A
1063 1069anti-parallel
Strand 3
A
997 1003anti-parallel
Strand 4
A
1041 1042anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1033 1037first strand
Strand 2
A
1005 1009anti-parallel
Strand 3
A
1056 1059anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1135 1137first strand
Strand 2
A
1173 1175anti-parallel
Strand 3
A
1152 1154anti-parallel
Strand 4
A
1160 1161anti-parallel
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There are 3 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1165 1166first strand
Strand 2
A
1142 1149anti-parallel
Strand 3
A
1185 1190anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
978 982first strand
Strand 2
B
1063 1069anti-parallel
Strand 3
B
997 1003anti-parallel
Strand 4
B
1041 1042anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1033 1036first strand
Strand 2
B
1006 1009anti-parallel
Strand 3
B
1056 1059anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1135 1137first strand
Strand 2
B
1173 1175anti-parallel
Strand 3
B
1152 1154anti-parallel
Strand 4
B
1160 1161anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1165 1166first strand
Strand 2
B
1142 1149anti-parallel
Strand 3
B
1185 1190anti-parallel
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