Analysis of interatomic Contacts of Structural Units in PDB entry:
8U75

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8U75 entry

There are 2 chains in PDB entry 8U75 (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	ALA 74	ALA 1192
B	ALA 74	ALA 1192

There are 72 helices in PDB entry 8U75. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	77	95	Right-handed alpha
Helix 2	AA2	A	102	120	Right-handed alpha
Helix 3	AA3	A	120	132	Right-handed alpha
Helix 4	AA4	A	134	141	Right-handed alpha
Helix 5	AA5	A	141	153	Right-handed alpha
Helix 6	AA6	A	156	188	Right-handed alpha
Helix 7	AA7	A	194	206	Right-handed alpha
Helix 8	AA8	A	209	221	Right-handed alpha
Helix 9	AA9	A	223	254	Right-handed alpha
Helix 10	AB1	A	260	273	Right-handed alpha
Helix 11	AB2	A	273	292	Right-handed alpha
Helix 12	AB3	A	296	320	Right-handed alpha
Helix 13	AB4	A	323	336	Right-handed alpha
Helix 14	AB5	A	342	375	Right-handed alpha
Helix 15	AB6	A	376	379	Right-handed 310
Helix 16	AB7	A	381	413	Right-handed alpha
Helix 17	AB8	A	418	426	Right-handed alpha
Helix 18	AB9	A	432	447	Right-handed alpha
Helix 19	AC1	A	449	482	Right-handed alpha
Helix 20	AC2	A	487	514	Right-handed alpha
Helix 21	AC3	A	522	530	Right-handed alpha
Helix 22	AC4	A	572	601	Right-handed alpha
Helix 23	AC5	A	604	619	Right-handed alpha
Helix 24	AC6	A	628	636	Right-handed alpha
Helix 25	AC7	A	640	652	Right-handed alpha
Helix 26	AC8	A	812	858	Right-handed alpha
Helix 27	AC9	A	860	889	Right-handed alpha
Helix 28	AD1	A	889	919	Right-handed alpha
Helix 29	AD2	A	923	943	Right-handed alpha
Helix 30	AD3	A	952	958	Right-handed alpha
Helix 31	AD4	A	966	976	Right-handed alpha
Helix 32	AD5	A	1043	1049	Right-handed alpha
Helix 33	AD6	A	1070	1080	Right-handed alpha
Helix 34	AD7	A	1085	1107	Right-handed alpha
Helix 35	AD8	A	1113	1123	Right-handed alpha
Helix 36	AD9	A	1155	1158	Right-handed 310
Helix 37	AE1	B	77	95	Right-handed alpha
Helix 38	AE2	B	102	120	Right-handed alpha
Helix 39	AE3	B	120	132	Right-handed alpha
Helix 40	AE4	B	134	141	Right-handed alpha
Helix 41	AE5	B	141	153	Right-handed alpha
Helix 42	AE6	B	155	188	Right-handed alpha
Helix 43	AE7	B	194	205	Right-handed alpha
Helix 44	AE8	B	209	221	Right-handed alpha
Helix 45	AE9	B	223	254	Right-handed alpha
Helix 46	AF1	B	260	273	Right-handed alpha
Helix 47	AF2	B	273	292	Right-handed alpha
Helix 48	AF3	B	296	320	Right-handed alpha
Helix 49	AF4	B	323	336	Right-handed alpha
Helix 50	AF5	B	342	375	Right-handed alpha
Helix 51	AF6	B	376	380	Right-handed 310
Helix 52	AF7	B	381	413	Right-handed alpha
Helix 53	AF8	B	418	428	Right-handed alpha
Helix 54	AF9	B	432	447	Right-handed alpha
Helix 55	AG1	B	449	481	Right-handed alpha
Helix 56	AG2	B	487	514	Right-handed alpha
Helix 57	AG3	B	522	530	Right-handed alpha
Helix 58	AG4	B	572	601	Right-handed alpha
Helix 59	AG5	B	604	619	Right-handed alpha
Helix 60	AG6	B	627	636	Right-handed alpha
Helix 61	AG7	B	640	652	Right-handed alpha
Helix 62	AG8	B	812	858	Right-handed alpha
Helix 63	AG9	B	860	889	Right-handed alpha
Helix 64	AH1	B	889	919	Right-handed alpha
Helix 65	AH2	B	923	943	Right-handed alpha
Helix 66	AH3	B	952	958	Right-handed alpha
Helix 67	AH4	B	966	976	Right-handed alpha
Helix 68	AH5	B	1043	1049	Right-handed alpha
Helix 69	AH6	B	1070	1080	Right-handed alpha
Helix 70	AH7	B	1085	1107	Right-handed alpha
Helix 71	AH8	B	1113	1123	Right-handed alpha
Helix 72	AH9	B	1155	1158	Right-handed 310

There are 11 sheets in PDB entry 8U75. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	978	982	first strand
Strand 2	A	1063	1069	anti-parallel
Strand 3	A	997	998	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	978	982	first strand
Strand 2	A	1063	1069	anti-parallel
Strand 3	A	1001	1003	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	987	989	first strand
Strand 2	A	1056	1059	anti-parallel
Strand 3	A	1006	1010	anti-parallel
Strand 4	A	1032	1036	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1125	1127	first strand
Strand 2	A	1185	1189	anti-parallel
Strand 3	A	1144	1149	anti-parallel
Strand 4	A	1165	1166	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1135	1137	first strand
Strand 2	A	1173	1175	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1151	1154	first strand
Strand 2	A	1159	1162	anti-parallel

Back to list of sheets
Back to top of page

There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	978	982	first strand
Strand 2	B	1063	1069	anti-parallel
Strand 3	B	997	1003	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	987	989	first strand
Strand 2	B	1056	1059	anti-parallel
Strand 3	B	1006	1010	anti-parallel
Strand 4	B	1032	1036	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1125	1127	first strand
Strand 2	B	1185	1189	anti-parallel
Strand 3	B	1144	1149	anti-parallel
Strand 4	B	1165	1166	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1135	1137	first strand
Strand 2	B	1173	1175	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1151	1154	first strand
Strand 2	B	1159	1162	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8U75

Analysis of interatomic Contacts of Structural Units in PDB entry:
8U75