Analysis of interatomic Contacts of Structural Units in PDB entry:
8U7G


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8U7G entry

There are 2 chains in PDB entry 8U7G (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 0TYR 481
B
 GLY 0TYR 481
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 43 helices in PDB entry 8U7G. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
13 18Right-handed alpha
Helix 2
AA2
A
28 35Right-handed alpha
Helix 3
AA3
A
36 42Right-handed alpha
Helix 4
AA4
A
49 53Right-handed 310
Helix 5
AA5
A
55 70Right-handed alpha
Helix 6
AA6
A
80 85Right-handed alpha
Helix 7
AA7
A
109 120Right-handed alpha
Helix 8
AA8
A
121 138Right-handed alpha
Helix 9
AA9
A
162 166Right-handed 310
Helix 10
AB1
A
174 193Right-handed alpha
Helix 11
AB2
A
194 196Right-handed 310
Helix 12
AB3
A
204 210Right-handed alpha
Helix 13
AB4
A
216 242Right-handed alpha
Helix 14
AB5
A
259 261Right-handed 310
Helix 15
AB6
A
262 274Right-handed alpha
Helix 16
AB7
A
274 282Right-handed alpha
Helix 17
AB8
A
363 378Right-handed alpha
Helix 18
AB9
A
395 413Right-handed alpha
Helix 19
AC1
A
430 437Right-handed 310
Helix 20
AC2
A
454 466Right-handed alpha
Helix 21
AC3
A
470 481Right-handed 310
Helix 22
AC4
B
13 18Right-handed alpha
Helix 23
AC5
B
28 36Right-handed alpha
Helix 24
AC6
B
36 42Right-handed alpha
Helix 25
AC7
B
49 53Right-handed 310
Helix 26
AC8
B
55 70Right-handed alpha
Helix 27
AC9
B
80 85Right-handed alpha
Helix 28
AD1
B
109 119Right-handed alpha
Helix 29
AD2
B
121 138Right-handed alpha
Helix 30
AD3
B
157 161Right-handed 310
Helix 31
AD4
B
174 193Right-handed alpha
Helix 32
AD5
B
194 196Right-handed 310
Helix 33
AD6
B
204 210Right-handed alpha
Helix 34
AD7
B
216 242Right-handed alpha
Helix 35
AD8
B
257 261Right-handed 310
Helix 36
AD9
B
262 274Right-handed alpha
Helix 37
AE1
B
274 284Right-handed alpha
Helix 38
AE2
B
363 378Right-handed alpha
Helix 39
AE3
B
395 413Right-handed alpha
Helix 40
AE4
B
430 437Right-handed 310
Helix 41
AE5
B
454 466Right-handed alpha
Helix 42
AE6
B
470 473Right-handed 310
Helix 43
AE7
B
474 479Right-handed alpha
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There are 10 sheets in PDB entry 8U7G. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 9 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
7 12first strand
Strand 2
A
74 78parallel
Strand 3
A
141 147parallel
Strand 4
A
198 203parallel
Strand 5
A
246 251parallel
Strand 6
A
315 318parallel
Strand 7
A
381 385parallel
Strand 8
A
417 423parallel
Strand 9
A
7 12parallel
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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
95 99first strand
Strand 2
A
102 107anti-parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
254 257first strand
Strand 2
A
322 327parallel
Strand 3
A
332 334anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
283 288first strand
Strand 2
A
300 309anti-parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
442 444first strand
Strand 2
A
451 453anti-parallel
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There are 9 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
7 12first strand
Strand 2
B
74 78parallel
Strand 3
B
141 147parallel
Strand 4
B
198 203parallel
Strand 5
B
246 251parallel
Strand 6
B
314 318parallel
Strand 7
B
381 385parallel
Strand 8
B
417 423parallel
Strand 9
B
7 12parallel
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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
95 98first strand
Strand 2
B
103 107anti-parallel
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There are 3 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
254 256first strand
Strand 2
B
322 328parallel
Strand 3
B
331 334anti-parallel
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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
285 288first strand
Strand 2
B
300 304anti-parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
442 445first strand
Strand 2
B
450 453anti-parallel
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