Analysis of interatomic Contacts of Structural Units in PDB entry:
8U7H

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8U7H entry

There is 1 chain in PDB entry 8U7H (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
C	ALA 1329	GLU 2527

There are 34 helices in PDB entry 8U7H. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	C	1346	1355	Right-handed alpha
Helix 2	AA2	C	1398	1405	Right-handed 310
Helix 3	AA3	C	1424	1442	Right-handed alpha
Helix 4	AA4	C	1453	1457	Right-handed 310
Helix 5	AA5	C	1458	1470	Right-handed alpha
Helix 6	AA6	C	1498	1508	Right-handed alpha
Helix 7	AA7	C	1524	1541	Right-handed alpha
Helix 8	AA8	C	1549	1560	Right-handed alpha
Helix 9	AA9	C	1568	1580	Right-handed alpha
Helix 10	AB1	C	1599	1604	Right-handed alpha
Helix 11	AB2	C	1605	1612	Right-handed alpha
Helix 12	AB3	C	1629	1633	Right-handed 310
Helix 13	AB4	C	1646	1650	Right-handed 310
Helix 14	AB5	C	1703	1712	Right-handed alpha
Helix 15	AB6	C	1770	1791	Right-handed alpha
Helix 16	AB7	C	1826	1837	Right-handed alpha
Helix 17	AB8	C	1871	1875	Right-handed 310
Helix 18	AB9	C	1913	1922	Right-handed alpha
Helix 19	AC1	C	1962	1966	Right-handed 310
Helix 20	AC2	C	1969	1987	Right-handed alpha
Helix 21	AC3	C	2040	2045	Right-handed alpha
Helix 22	AC4	C	2051	2054	Right-handed 310
Helix 23	AC5	C	2055	2068	Right-handed alpha
Helix 24	AC6	C	2070	2078	Right-handed alpha
Helix 25	AC7	C	2079	2086	Right-handed alpha
Helix 26	AC8	C	2107	2112	Right-handed alpha
Helix 27	AC9	C	2118	2122	Right-handed 310
Helix 28	AD1	C	2124	2133	Right-handed alpha
Helix 29	AD2	C	2134	2140	Right-handed alpha
Helix 30	AD3	C	2208	2211	Right-handed 310
Helix 31	AD4	C	2278	2281	Right-handed 310
Helix 32	AD5	C	2311	2314	Right-handed 310
Helix 33	AD6	C	2389	2394	Right-handed alpha
Helix 34	AD7	C	2499	2526	Right-handed alpha

There are 16 sheets in PDB entry 8U7H. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1373	1374	first strand
Strand 2	C	1388	1393	anti-parallel
Strand 3	C	1377	1378	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1373	1374	first strand
Strand 2	C	1388	1393	anti-parallel
Strand 3	C	1334	1338	parallel
Strand 4	C	1413	1415	parallel

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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1418	1420	first strand
Strand 2	C	1447	1452	parallel
Strand 3	C	1482	1485	parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1751	1752	first strand
Strand 2	C	1761	1768	anti-parallel
Strand 3	C	1690	1697	anti-parallel
Strand 4	C	1809	1814	anti-parallel
Strand 5	C	1823	1825	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1730	1731	first strand
Strand 2	C	1740	1743	anti-parallel
Strand 3	C	1746	1748	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1894	1898	first strand
Strand 2	C	1901	1905	anti-parallel
Strand 3	C	1944	1948	anti-parallel
Strand 4	C	1935	1939	anti-parallel

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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1953	1954	first strand
Strand 2	C	2000	2002	anti-parallel
Strand 3	C	2013	2015	anti-parallel

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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1990	1991	first strand
Strand 2	C	2022	2023	anti-parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2142	2145	first strand
Strand 2	C	2492	2496	anti-parallel
Strand 3	C	2466	2475	anti-parallel
Strand 4	C	2454	2463	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2152	2156	first strand
Strand 2	C	2166	2171	anti-parallel
Strand 3	C	2179	2183	anti-parallel

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There are 3 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2199	2207	first strand
Strand 2	C	2212	2219	anti-parallel
Strand 3	C	2224	2228	anti-parallel

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There are 4 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2245	2247	first strand
Strand 2	C	2262	2267	anti-parallel
Strand 3	C	2271	2276	anti-parallel
Strand 4	C	2291	2292	anti-parallel

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There are 3 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2316	2318	first strand
Strand 2	C	2322	2325	anti-parallel
Strand 3	C	2334	2337	anti-parallel

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There are 4 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2354	2359	first strand
Strand 2	C	2363	2367	anti-parallel
Strand 3	C	2372	2376	anti-parallel
Strand 4	C	2383	2388	anti-parallel

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There are 2 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2416	2419	first strand
Strand 2	C	2425	2428	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	2434	2437	first strand
Strand 2	C	2444	2448	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8U7H

Analysis of interatomic Contacts of Structural Units in PDB entry:
8U7H