Analysis of interatomic Contacts of Structural Units in PDB entry:
8U7M

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8U7M entry

There are 8 chains in PDB entry 8U7M (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	GLY 17	PHE 514
B	GLY 17	PHE 514
C	GLY 17	PHE 514
D	GLY 17	PHE 514
E	GLY 17	PHE 514
F	GLY 17	PHE 514
G	GLY 17	PHE 514
H	GLY 17	PHE 514

There are174 helices in PDB entry 8U7M. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	19	25	Right-handed alpha
Helix 2	AA2	A	31	33	Right-handed 310
Helix 3	AA3	A	75	85	Right-handed alpha
Helix 4	AA4	A	96	110	Right-handed alpha
Helix 5	AA5	A	126	138	Right-handed alpha
Helix 6	AA6	A	159	164	Right-handed alpha
Helix 7	AA7	A	169	173	Right-handed 310
Helix 8	AA8	A	174	178	Right-handed 310
Helix 9	AA9	A	181	185	Right-handed 310
Helix 10	AB1	A	193	203	Right-handed alpha
Helix 11	AB2	A	224	233	Right-handed alpha
Helix 12	AB3	A	255	265	Right-handed alpha
Helix 13	AB4	A	280	294	Right-handed alpha
Helix 14	AB5	A	306	316	Right-handed alpha
Helix 15	AB6	A	332	338	Right-handed alpha
Helix 16	AB7	A	342	355	Right-handed alpha
Helix 17	AB8	A	356	358	Right-handed 310
Helix 18	AB9	A	369	380	Right-handed alpha
Helix 19	AC1	A	452	472	Right-handed alpha
Helix 20	AC2	A	475	486	Right-handed alpha
Helix 21	AC3	A	494	501	Right-handed alpha
Helix 22	AC4	B	19	25	Right-handed alpha
Helix 23	AC5	B	31	33	Right-handed 310
Helix 24	AC6	B	75	85	Right-handed alpha
Helix 25	AC7	B	96	110	Right-handed alpha
Helix 26	AC8	B	126	138	Right-handed alpha
Helix 27	AC9	B	159	164	Right-handed alpha
Helix 28	AD1	B	169	173	Right-handed 310
Helix 29	AD2	B	174	178	Right-handed 310
Helix 30	AD3	B	181	185	Right-handed 310
Helix 31	AD4	B	193	203	Right-handed alpha
Helix 32	AD5	B	223	233	Right-handed alpha
Helix 33	AD6	B	255	265	Right-handed alpha
Helix 34	AD7	B	280	294	Right-handed alpha
Helix 35	AD8	B	306	316	Right-handed alpha
Helix 36	AD9	B	332	338	Right-handed alpha
Helix 37	AE1	B	342	355	Right-handed alpha
Helix 38	AE2	B	356	358	Right-handed 310
Helix 39	AE3	B	369	380	Right-handed alpha
Helix 40	AE4	B	387	391	Right-handed 310
Helix 41	AE5	B	452	472	Right-handed alpha
Helix 42	AE6	B	475	486	Right-handed alpha
Helix 43	AE7	B	494	501	Right-handed alpha
Helix 44	AE8	C	19	25	Right-handed alpha
Helix 45	AE9	C	31	33	Right-handed 310
Helix 46	AF1	C	75	85	Right-handed alpha
Helix 47	AF2	C	96	110	Right-handed alpha
Helix 48	AF3	C	126	138	Right-handed alpha
Helix 49	AF4	C	159	164	Right-handed alpha
Helix 50	AF5	C	169	173	Right-handed 310
Helix 51	AF6	C	174	178	Right-handed 310
Helix 52	AF7	C	181	185	Right-handed 310
Helix 53	AF8	C	193	203	Right-handed alpha
Helix 54	AF9	C	224	233	Right-handed alpha
Helix 55	AG1	C	255	265	Right-handed alpha
Helix 56	AG2	C	280	294	Right-handed alpha
Helix 57	AG3	C	306	316	Right-handed alpha
Helix 58	AG4	C	332	338	Right-handed alpha
Helix 59	AG5	C	342	355	Right-handed alpha
Helix 60	AG6	C	356	358	Right-handed 310
Helix 61	AG7	C	369	380	Right-handed alpha
Helix 62	AG8	C	387	391	Right-handed 310
Helix 63	AG9	C	452	472	Right-handed alpha
Helix 64	AH1	C	475	486	Right-handed alpha
Helix 65	AH2	C	494	501	Right-handed alpha
Helix 66	AH3	D	19	25	Right-handed alpha
Helix 67	AH4	D	31	33	Right-handed 310
Helix 68	AH5	D	75	85	Right-handed alpha
Helix 69	AH6	D	96	110	Right-handed alpha
Helix 70	AH7	D	126	138	Right-handed alpha
Helix 71	AH8	D	159	164	Right-handed alpha
Helix 72	AH9	D	169	173	Right-handed 310
Helix 73	AI1	D	174	178	Right-handed 310
Helix 74	AI2	D	181	185	Right-handed 310
Helix 75	AI3	D	193	203	Right-handed alpha
Helix 76	AI4	D	224	233	Right-handed alpha
Helix 77	AI5	D	255	265	Right-handed alpha
Helix 78	AI6	D	280	294	Right-handed alpha
Helix 79	AI7	D	306	316	Right-handed alpha
Helix 80	AI8	D	332	338	Right-handed alpha
Helix 81	AI9	D	342	355	Right-handed alpha
Helix 82	AJ1	D	356	358	Right-handed 310
Helix 83	AJ2	D	369	380	Right-handed alpha
Helix 84	AJ3	D	387	391	Right-handed 310
Helix 85	AJ4	D	452	472	Right-handed alpha
Helix 86	AJ5	D	475	486	Right-handed alpha
Helix 87	AJ6	D	494	501	Right-handed alpha
Helix 88	AJ7	E	19	25	Right-handed alpha
Helix 89	AJ8	E	31	33	Right-handed 310
Helix 90	AJ9	E	75	85	Right-handed alpha
Helix 91	AK1	E	96	110	Right-handed alpha
Helix 92	AK2	E	126	138	Right-handed alpha
Helix 93	AK3	E	159	164	Right-handed alpha
Helix 94	AK4	E	169	173	Right-handed 310
Helix 95	AK5	E	174	178	Right-handed 310
Helix 96	AK6	E	181	185	Right-handed 310
Helix 97	AK7	E	193	203	Right-handed alpha
Helix 98	AK8	E	224	233	Right-handed alpha
Helix 99	AK9	E	255	265	Right-handed alpha
Helix 100	AL1	E	280	294	Right-handed alpha
Helix 101	AL2	E	306	316	Right-handed alpha
Helix 102	AL3	E	332	338	Right-handed alpha
Helix 103	AL4	E	342	355	Right-handed alpha
Helix 104	AL5	E	356	358	Right-handed 310
Helix 105	AL6	E	369	380	Right-handed alpha
Helix 106	AL7	E	452	472	Right-handed alpha
Helix 107	AL8	E	475	486	Right-handed alpha
Helix 108	AL9	E	494	501	Right-handed alpha
Helix 109	AM1	F	19	25	Right-handed alpha
Helix 110	AM2	F	31	33	Right-handed 310
Helix 111	AM3	F	75	85	Right-handed alpha
Helix 112	AM4	F	96	110	Right-handed alpha
Helix 113	AM5	F	126	138	Right-handed alpha
Helix 114	AM6	F	159	164	Right-handed alpha
Helix 115	AM7	F	169	173	Right-handed 310
Helix 116	AM8	F	174	178	Right-handed 310
Helix 117	AM9	F	181	185	Right-handed 310
Helix 118	AN1	F	193	203	Right-handed alpha
Helix 119	AN2	F	224	233	Right-handed alpha
Helix 120	AN3	F	255	265	Right-handed alpha
Helix 121	AN4	F	280	294	Right-handed alpha
Helix 122	AN5	F	306	316	Right-handed alpha
Helix 123	AN6	F	332	338	Right-handed alpha
Helix 124	AN7	F	342	355	Right-handed alpha
Helix 125	AN8	F	356	358	Right-handed 310
Helix 126	AN9	F	369	380	Right-handed alpha
Helix 127	AO1	F	387	391	Right-handed 310
Helix 128	AO2	F	452	472	Right-handed alpha
Helix 129	AO3	F	475	486	Right-handed alpha
Helix 130	AO4	F	494	501	Right-handed alpha
Helix 131	AO5	G	19	25	Right-handed alpha
Helix 132	AO6	G	31	33	Right-handed 310
Helix 133	AO7	G	75	85	Right-handed alpha
Helix 134	AO8	G	96	110	Right-handed alpha
Helix 135	AO9	G	126	138	Right-handed alpha
Helix 136	AP1	G	159	164	Right-handed alpha
Helix 137	AP2	G	169	173	Right-handed 310
Helix 138	AP3	G	174	178	Right-handed 310
Helix 139	AP4	G	181	185	Right-handed 310
Helix 140	AP5	G	193	203	Right-handed alpha
Helix 141	AP6	G	224	233	Right-handed alpha
Helix 142	AP7	G	255	265	Right-handed alpha
Helix 143	AP8	G	280	294	Right-handed alpha
Helix 144	AP9	G	306	316	Right-handed alpha
Helix 145	AQ1	G	332	338	Right-handed alpha
Helix 146	AQ2	G	342	355	Right-handed alpha
Helix 147	AQ3	G	356	358	Right-handed 310
Helix 148	AQ4	G	369	380	Right-handed alpha
Helix 149	AQ5	G	387	391	Right-handed 310
Helix 150	AQ6	G	452	472	Right-handed alpha
Helix 151	AQ7	G	475	486	Right-handed alpha
Helix 152	AQ8	G	494	501	Right-handed alpha
Helix 153	AQ9	H	19	25	Right-handed alpha
Helix 154	AR1	H	31	33	Right-handed 310
Helix 155	AR2	H	75	85	Right-handed alpha
Helix 156	AR3	H	96	110	Right-handed alpha
Helix 157	AR4	H	126	138	Right-handed alpha
Helix 158	AR5	H	159	164	Right-handed alpha
Helix 159	AR6	H	169	173	Right-handed 310
Helix 160	AR7	H	174	178	Right-handed 310
Helix 161	AR8	H	181	185	Right-handed 310
Helix 162	AR9	H	193	203	Right-handed alpha
Helix 163	AS1	H	224	233	Right-handed alpha
Helix 164	AS2	H	255	265	Right-handed alpha
Helix 165	AS3	H	280	294	Right-handed alpha
Helix 166	AS4	H	306	316	Right-handed alpha
Helix 167	AS5	H	332	338	Right-handed alpha
Helix 168	AS6	H	342	355	Right-handed alpha
Helix 169	AS7	H	356	358	Right-handed 310
Helix 170	AS8	H	369	380	Right-handed alpha
Helix 171	AS9	H	387	391	Right-handed 310
Helix 172	AT1	H	452	472	Right-handed alpha
Helix 173	AT2	H	475	486	Right-handed alpha
Helix 174	AT3	H	494	501	Right-handed alpha

There are 40 sheets in PDB entry 8U7M. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3, AB4, AB5, AB6, AB7, AB8, AB9, AC1, AC2, AC3, AC4, AC5, AC6, AC7, AC8, AC9, AD1, AD2, AD3, AD4, AD5, AD6, AD7, AD8, AD9, AE1, AE2, AE3, AE4,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	35	37	first strand
Strand 2	A	490	492	anti-parallel

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There are 2 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	53	56	first strand
Strand 2	A	59	61	anti-parallel

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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	65	67	first strand
Strand 2	A	383	386	parallel
Strand 3	A	361	364	parallel
Strand 4	A	320	323	parallel
Strand 5	A	298	304	parallel
Strand 6	A	270	273	parallel
Strand 7	A	247	250	parallel
Strand 8	A	90	91	parallel

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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	142	144	first strand
Strand 2	A	156	158	anti-parallel

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There are 3 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	188	189	first strand
Strand 2	A	208	212	parallel
Strand 3	A	221	223	anti-parallel

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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	35	37	first strand
Strand 2	B	490	492	anti-parallel

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There are 2 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	53	56	first strand
Strand 2	B	59	61	anti-parallel

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There are 8 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	65	67	first strand
Strand 2	B	383	386	parallel
Strand 3	B	361	364	parallel
Strand 4	B	320	323	parallel
Strand 5	B	298	304	parallel
Strand 6	B	270	273	parallel
Strand 7	B	247	250	parallel
Strand 8	B	90	91	parallel

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There are 2 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	142	144	first strand
Strand 2	B	156	158	anti-parallel

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There are 3 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	188	189	first strand
Strand 2	B	209	212	parallel
Strand 3	B	221	222	anti-parallel

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There are 2 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	35	37	first strand
Strand 2	C	490	492	anti-parallel

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There are 2 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	53	56	first strand
Strand 2	C	59	61	anti-parallel

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There are 8 strands in AB4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	65	67	first strand
Strand 2	C	383	386	parallel
Strand 3	C	361	364	parallel
Strand 4	C	321	323	parallel
Strand 5	C	298	304	parallel
Strand 6	C	270	273	parallel
Strand 7	C	247	250	parallel
Strand 8	C	90	91	parallel

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There are 2 strands in AB5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	142	144	first strand
Strand 2	C	156	158	anti-parallel

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There are 3 strands in AB6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	188	189	first strand
Strand 2	C	208	212	parallel
Strand 3	C	221	223	anti-parallel

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There are 2 strands in AB7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	35	37	first strand
Strand 2	D	490	492	anti-parallel

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There are 2 strands in AB8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	53	56	first strand
Strand 2	D	59	61	anti-parallel

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There are 8 strands in AB9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	65	67	first strand
Strand 2	D	383	386	parallel
Strand 3	D	361	364	parallel
Strand 4	D	320	323	parallel
Strand 5	D	298	304	parallel
Strand 6	D	270	273	parallel
Strand 7	D	247	250	parallel
Strand 8	D	90	91	parallel

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There are 2 strands in AC1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	142	144	first strand
Strand 2	D	156	158	anti-parallel

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There are 3 strands in AC2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	188	189	first strand
Strand 2	D	208	212	parallel
Strand 3	D	221	223	anti-parallel

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There are 2 strands in AC3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	35	37	first strand
Strand 2	E	490	492	anti-parallel

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There are 2 strands in AC4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	53	56	first strand
Strand 2	E	59	61	anti-parallel

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There are 8 strands in AC5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	65	67	first strand
Strand 2	E	383	386	parallel
Strand 3	E	361	364	parallel
Strand 4	E	320	323	parallel
Strand 5	E	298	304	parallel
Strand 6	E	270	273	parallel
Strand 7	E	247	250	parallel
Strand 8	E	90	91	parallel

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There are 2 strands in AC6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	142	144	first strand
Strand 2	E	156	158	anti-parallel

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There are 2 strands in AC7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	208	210	first strand
Strand 2	E	221	223	anti-parallel

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There are 2 strands in AC8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	35	37	first strand
Strand 2	F	490	492	anti-parallel

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There are 2 strands in AC9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	53	56	first strand
Strand 2	F	59	61	anti-parallel

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There are 8 strands in AD1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	65	67	first strand
Strand 2	F	383	386	parallel
Strand 3	F	361	364	parallel
Strand 4	F	320	323	parallel
Strand 5	F	298	304	parallel
Strand 6	F	270	273	parallel
Strand 7	F	247	250	parallel
Strand 8	F	90	91	parallel

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There are 2 strands in AD2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	142	144	first strand
Strand 2	F	156	158	anti-parallel

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There are 3 strands in AD3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	188	189	first strand
Strand 2	F	208	212	parallel
Strand 3	F	221	223	anti-parallel

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There are 2 strands in AD4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	35	37	first strand
Strand 2	G	490	492	anti-parallel

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There are 2 strands in AD5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	53	56	first strand
Strand 2	G	59	61	anti-parallel

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There are 8 strands in AD6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	65	67	first strand
Strand 2	G	383	386	parallel
Strand 3	G	361	364	parallel
Strand 4	G	320	323	parallel
Strand 5	G	298	304	parallel
Strand 6	G	270	273	parallel
Strand 7	G	247	250	parallel
Strand 8	G	90	91	parallel

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There are 2 strands in AD7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	142	144	first strand
Strand 2	G	156	158	anti-parallel

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There are 2 strands in AD8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	G	208	210	first strand
Strand 2	G	221	223	anti-parallel

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There are 2 strands in AD9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	35	37	first strand
Strand 2	H	490	492	anti-parallel

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There are 2 strands in AE1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	53	56	first strand
Strand 2	H	59	61	anti-parallel

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There are 8 strands in AE2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	65	67	first strand
Strand 2	H	383	386	parallel
Strand 3	H	361	364	parallel
Strand 4	H	320	323	parallel
Strand 5	H	298	304	parallel
Strand 6	H	270	273	parallel
Strand 7	H	247	250	parallel
Strand 8	H	90	91	parallel

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There are 2 strands in AE3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	142	144	first strand
Strand 2	H	156	158	anti-parallel

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There are 3 strands in AE4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	H	188	189	first strand
Strand 2	H	208	212	parallel
Strand 3	H	221	223	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8U7M

Analysis of interatomic Contacts of Structural Units in PDB entry:
8U7M