Analysis of interatomic Contacts of Structural Units in PDB entry:
8U7O

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8U7O entry

There are 2 chains in PDB entry 8U7O (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	LYS 76	ARG 1190
B	LYS 76	TYR 1194

There are 81 helices in PDB entry 8U7O. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	A	77	95	Right-handed alpha
Helix 2	AA2	A	102	118	Right-handed alpha
Helix 3	AA3	A	120	131	Right-handed alpha
Helix 4	AA4	A	134	151	Right-handed alpha
Helix 5	AA5	A	155	161	Right-handed alpha
Helix 6	AA6	A	162	189	Right-handed alpha
Helix 7	AA7	A	194	207	Right-handed alpha
Helix 8	AA8	A	210	221	Right-handed alpha
Helix 9	AA9	A	224	253	Right-handed alpha
Helix 10	AB1	A	260	291	Right-handed alpha
Helix 11	AB2	A	297	319	Right-handed alpha
Helix 12	AB3	A	321	337	Right-handed alpha
Helix 13	AB4	A	342	376	Right-handed alpha
Helix 14	AB5	A	377	379	Right-handed 310
Helix 15	AB6	A	381	414	Right-handed alpha
Helix 16	AB7	A	418	427	Right-handed alpha
Helix 17	AB8	A	433	446	Right-handed alpha
Helix 18	AB9	A	449	482	Right-handed alpha
Helix 19	AC1	A	487	514	Right-handed alpha
Helix 20	AC2	A	522	530	Right-handed alpha
Helix 21	AC3	A	573	601	Right-handed alpha
Helix 22	AC4	A	605	618	Right-handed alpha
Helix 23	AC5	A	628	636	Right-handed alpha
Helix 24	AC6	A	639	652	Right-handed alpha
Helix 25	AC7	A	678	692	Right-handed alpha
Helix 26	AC8	A	694	700	Right-handed alpha
Helix 27	AC9	A	730	753	Right-handed alpha
Helix 28	AD1	A	761	774	Right-handed alpha
Helix 29	AD2	A	809	858	Right-handed alpha
Helix 30	AD3	A	860	889	Right-handed alpha
Helix 31	AD4	A	890	919	Right-handed alpha
Helix 32	AD5	A	923	943	Right-handed alpha
Helix 33	AD6	A	954	962	Right-handed alpha
Helix 34	AD7	A	966	975	Right-handed alpha
Helix 35	AD8	A	1044	1049	Right-handed alpha
Helix 36	AD9	A	1070	1080	Right-handed alpha
Helix 37	AE1	A	1084	1100	Right-handed alpha
Helix 38	AE2	A	1100	1105	Right-handed alpha
Helix 39	AE3	A	1113	1121	Right-handed alpha
Helix 40	AE4	B	77	95	Right-handed alpha
Helix 41	AE5	B	102	118	Right-handed alpha
Helix 42	AE6	B	120	132	Right-handed alpha
Helix 43	AE7	B	134	151	Right-handed alpha
Helix 44	AE8	B	155	161	Right-handed alpha
Helix 45	AE9	B	162	189	Right-handed alpha
Helix 46	AF1	B	194	207	Right-handed alpha
Helix 47	AF2	B	210	221	Right-handed alpha
Helix 48	AF3	B	224	254	Right-handed alpha
Helix 49	AF4	B	260	291	Right-handed alpha
Helix 50	AF5	B	297	319	Right-handed alpha
Helix 51	AF6	B	321	337	Right-handed alpha
Helix 52	AF7	B	342	376	Right-handed alpha
Helix 53	AF8	B	377	379	Right-handed 310
Helix 54	AF9	B	381	414	Right-handed alpha
Helix 55	AG1	B	418	427	Right-handed alpha
Helix 56	AG2	B	433	445	Right-handed alpha
Helix 57	AG3	B	449	482	Right-handed alpha
Helix 58	AG4	B	487	514	Right-handed alpha
Helix 59	AG5	B	522	530	Right-handed alpha
Helix 60	AG6	B	573	601	Right-handed alpha
Helix 61	AG7	B	605	618	Right-handed alpha
Helix 62	AG8	B	628	636	Right-handed alpha
Helix 63	AG9	B	639	652	Right-handed alpha
Helix 64	AH1	B	679	691	Right-handed alpha
Helix 65	AH2	B	691	700	Right-handed alpha
Helix 66	AH3	B	730	753	Right-handed alpha
Helix 67	AH4	B	754	756	Right-handed 310
Helix 68	AH5	B	763	774	Right-handed alpha
Helix 69	AH6	B	808	812	Right-handed 310
Helix 70	AH7	B	813	852	Right-handed alpha
Helix 71	AH8	B	853	858	Right-handed alpha
Helix 72	AH9	B	860	889	Right-handed alpha
Helix 73	AI1	B	890	919	Right-handed alpha
Helix 74	AI2	B	923	943	Right-handed alpha
Helix 75	AI3	B	954	962	Right-handed alpha
Helix 76	AI4	B	966	975	Right-handed alpha
Helix 77	AI5	B	1044	1049	Right-handed alpha
Helix 78	AI6	B	1070	1080	Right-handed alpha
Helix 79	AI7	B	1084	1100	Right-handed alpha
Helix 80	AI8	B	1100	1105	Right-handed alpha
Helix 81	AI9	B	1113	1121	Right-handed alpha

There are 8 sheets in PDB entry 8U7O. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	980	982	first strand
Strand 2	A	1063	1069	anti-parallel
Strand 3	A	997	1003	anti-parallel
Strand 4	A	1041	1042	anti-parallel

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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	987	989	first strand
Strand 2	A	1055	1059	anti-parallel
Strand 3	A	1006	1010	anti-parallel
Strand 4	A	1032	1036	anti-parallel

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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1124	1126	first strand
Strand 2	A	1185	1189	anti-parallel
Strand 3	A	1144	1149	anti-parallel
Strand 4	A	1165	1166	anti-parallel

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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	1135	1137	first strand
Strand 2	A	1173	1176	anti-parallel
Strand 3	A	1151	1154	anti-parallel
Strand 4	A	1160	1162	anti-parallel

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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	980	982	first strand
Strand 2	B	1063	1069	anti-parallel
Strand 3	B	997	1003	anti-parallel
Strand 4	B	1041	1042	anti-parallel

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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	987	989	first strand
Strand 2	B	1055	1059	anti-parallel
Strand 3	B	1006	1010	anti-parallel
Strand 4	B	1032	1036	anti-parallel

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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1124	1126	first strand
Strand 2	B	1185	1190	anti-parallel
Strand 3	B	1142	1149	anti-parallel
Strand 4	B	1165	1166	anti-parallel

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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1135	1137	first strand
Strand 2	B	1173	1176	anti-parallel
Strand 3	B	1151	1154	anti-parallel
Strand 4	B	1160	1162	anti-parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8U7O

Analysis of interatomic Contacts of Structural Units in PDB entry:
8U7O