Analysis of interatomic Contacts of Structural Units in PDB entry:
8U7P


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8U7P entry

There are 2 chains in PDB entry 8U7P (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 76ASN 1191
B
 LYS 76ASN 1191
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 71 helices in PDB entry 8U7P. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
77 95Right-handed alpha
Helix 2
AA2
A
102 120Right-handed alpha
Helix 3
AA3
A
120 126Right-handed alpha
Helix 4
AA4
A
134 151Right-handed alpha
Helix 5
AA5
A
155 162Right-handed alpha
Helix 6
AA6
A
162 180Right-handed alpha
Helix 7
AA7
A
180 189Right-handed alpha
Helix 8
AA8
A
194 206Right-handed alpha
Helix 9
AA9
A
210 221Right-handed alpha
Helix 10
AB1
A
224 254Right-handed alpha
Helix 11
AB2
A
260 291Right-handed alpha
Helix 12
AB3
A
298 319Right-handed alpha
Helix 13
AB4
A
321 336Right-handed alpha
Helix 14
AB5
A
342 376Right-handed alpha
Helix 15
AB6
A
381 413Right-handed alpha
Helix 16
AB7
A
418 427Right-handed alpha
Helix 17
AB8
A
432 447Right-handed alpha
Helix 18
AB9
A
449 482Right-handed alpha
Helix 19
AC1
A
487 514Right-handed alpha
Helix 20
AC2
A
523 529Right-handed alpha
Helix 21
AC3
A
572 600Right-handed alpha
Helix 22
AC4
A
604 621Right-handed alpha
Helix 23
AC5
A
628 636Right-handed alpha
Helix 24
AC6
A
639 652Right-handed alpha
Helix 25
AC7
A
816 854Right-handed alpha
Helix 26
AC8
A
860 889Right-handed alpha
Helix 27
AC9
A
889 919Right-handed alpha
Helix 28
AD1
A
923 943Right-handed alpha
Helix 29
AD2
A
953 962Right-handed alpha
Helix 30
AD3
A
966 972Right-handed alpha
Helix 31
AD4
A
1044 1049Right-handed alpha
Helix 32
AD5
A
1070 1081Right-handed alpha
Helix 33
AD6
A
1084 1106Right-handed alpha
Helix 34
AD7
A
1113 1120Right-handed alpha
Helix 35
AD8
B
77 96Right-handed alpha
Helix 36
AD9
B
102 120Right-handed alpha
Helix 37
AE1
B
120 125Right-handed alpha
Helix 38
AE2
B
127 132Right-handed alpha
Helix 39
AE3
B
134 151Right-handed alpha
Helix 40
AE4
B
155 162Right-handed alpha
Helix 41
AE5
B
162 180Right-handed alpha
Helix 42
AE6
B
180 189Right-handed alpha
Helix 43
AE7
B
194 206Right-handed alpha
Helix 44
AE8
B
210 221Right-handed alpha
Helix 45
AE9
B
223 253Right-handed alpha
Helix 46
AF1
B
260 273Right-handed alpha
Helix 47
AF2
B
273 291Right-handed alpha
Helix 48
AF3
B
298 319Right-handed alpha
Helix 49
AF4
B
321 336Right-handed alpha
Helix 50
AF5
B
342 376Right-handed alpha
Helix 51
AF6
B
381 414Right-handed alpha
Helix 52
AF7
B
418 427Right-handed alpha
Helix 53
AF8
B
432 447Right-handed alpha
Helix 54
AF9
B
449 482Right-handed alpha
Helix 55
AG1
B
487 514Right-handed alpha
Helix 56
AG2
B
523 529Right-handed alpha
Helix 57
AG3
B
572 600Right-handed alpha
Helix 58
AG4
B
604 621Right-handed alpha
Helix 59
AG5
B
628 636Right-handed alpha
Helix 60
AG6
B
639 652Right-handed alpha
Helix 61
AG7
B
816 854Right-handed alpha
Helix 62
AG8
B
860 889Right-handed alpha
Helix 63
AG9
B
889 919Right-handed alpha
Helix 64
AH1
B
923 943Right-handed alpha
Helix 65
AH2
B
953 962Right-handed alpha
Helix 66
AH3
B
966 976Right-handed alpha
Helix 67
AH4
B
1043 1049Right-handed alpha
Helix 68
AH5
B
1070 1081Right-handed alpha
Helix 69
AH6
B
1084 1106Right-handed alpha
Helix 70
AH7
B
1113 1120Right-handed alpha
Helix 71
AH8
B
1121 1123Right-handed 310
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There are 8 sheets in PDB entry 8U7P. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
980 982first strand
Strand 2
A
1063 1069anti-parallel
Strand 3
A
997 1003anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1032 1036first strand
Strand 2
A
1006 1010anti-parallel
Strand 3
A
1056 1059anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1135 1137first strand
Strand 2
A
1173 1176anti-parallel
Strand 3
A
1151 1154anti-parallel
Strand 4
A
1160 1162anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1142 1149first strand
Strand 2
A
1185 1190anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
980 982first strand
Strand 2
B
1063 1069anti-parallel
Strand 3
B
997 1003anti-parallel
Strand 4
B
1041 1042anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1032 1036first strand
Strand 2
B
1006 1010anti-parallel
Strand 3
B
1056 1059anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1135 1137first strand
Strand 2
B
1173 1176anti-parallel
Strand 3
B
1151 1154anti-parallel
Strand 4
B
1160 1162anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1142 1149first strand
Strand 2
B
1185 1190anti-parallel
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