Analysis of interatomic Contacts of Structural Units in PDB entry:
8U7R


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8U7R entry

There are 2 chains in PDB entry 8U7R (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 75ALA 1192
B
 PRO 75ALA 1192
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 81 helices in PDB entry 8U7R. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
77 94Right-handed alpha
Helix 2
AA2
A
102 120Right-handed alpha
Helix 3
AA3
A
120 132Right-handed alpha
Helix 4
AA4
A
134 153Right-handed alpha
Helix 5
AA5
A
155 162Right-handed alpha
Helix 6
AA6
A
162 188Right-handed alpha
Helix 7
AA7
A
194 205Right-handed alpha
Helix 8
AA8
A
209 220Right-handed alpha
Helix 9
AA9
A
223 254Right-handed alpha
Helix 10
AB1
A
260 291Right-handed alpha
Helix 11
AB2
A
298 319Right-handed alpha
Helix 12
AB3
A
321 337Right-handed alpha
Helix 13
AB4
A
342 375Right-handed alpha
Helix 14
AB5
A
376 379Right-handed 310
Helix 15
AB6
A
381 414Right-handed alpha
Helix 16
AB7
A
418 427Right-handed alpha
Helix 17
AB8
A
432 447Right-handed alpha
Helix 18
AB9
A
450 481Right-handed alpha
Helix 19
AC1
A
482 485Right-handed 310
Helix 20
AC2
A
487 513Right-handed alpha
Helix 21
AC3
A
522 529Right-handed alpha
Helix 22
AC4
A
571 600Right-handed alpha
Helix 23
AC5
A
604 621Right-handed alpha
Helix 24
AC6
A
628 636Right-handed alpha
Helix 25
AC7
A
637 640Right-handed 310
Helix 26
AC8
A
641 653Right-handed alpha
Helix 27
AC9
A
678 700Right-handed alpha
Helix 28
AD1
A
728 757Right-handed alpha
Helix 29
AD2
A
761 774Right-handed alpha
Helix 30
AD3
A
813 854Right-handed alpha
Helix 31
AD4
A
855 857Right-handed 310
Helix 32
AD5
A
860 889Right-handed alpha
Helix 33
AD6
A
889 919Right-handed alpha
Helix 34
AD7
A
923 943Right-handed alpha
Helix 35
AD8
A
952 958Right-handed alpha
Helix 36
AD9
A
966 977Right-handed alpha
Helix 37
AE1
A
1043 1049Right-handed alpha
Helix 38
AE2
A
1069 1080Right-handed alpha
Helix 39
AE3
A
1085 1107Right-handed alpha
Helix 40
AE4
A
1113 1124Right-handed alpha
Helix 41
AE5
B
77 94Right-handed alpha
Helix 42
AE6
B
102 120Right-handed alpha
Helix 43
AE7
B
120 132Right-handed alpha
Helix 44
AE8
B
134 153Right-handed alpha
Helix 45
AE9
B
155 162Right-handed alpha
Helix 46
AF1
B
162 188Right-handed alpha
Helix 47
AF2
B
194 204Right-handed alpha
Helix 48
AF3
B
209 220Right-handed alpha
Helix 49
AF4
B
223 254Right-handed alpha
Helix 50
AF5
B
260 291Right-handed alpha
Helix 51
AF6
B
298 318Right-handed alpha
Helix 52
AF7
B
319 337Right-handed alpha
Helix 53
AF8
B
342 375Right-handed alpha
Helix 54
AF9
B
376 379Right-handed 310
Helix 55
AG1
B
381 414Right-handed alpha
Helix 56
AG2
B
418 427Right-handed alpha
Helix 57
AG3
B
433 447Right-handed alpha
Helix 58
AG4
B
450 481Right-handed alpha
Helix 59
AG5
B
482 485Right-handed 310
Helix 60
AG6
B
487 513Right-handed alpha
Helix 61
AG7
B
522 529Right-handed alpha
Helix 62
AG8
B
571 600Right-handed alpha
Helix 63
AG9
B
604 621Right-handed alpha
Helix 64
AH1
B
628 636Right-handed alpha
Helix 65
AH2
B
637 639Right-handed 310
Helix 66
AH3
B
640 653Right-handed alpha
Helix 67
AH4
B
678 700Right-handed alpha
Helix 68
AH5
B
728 757Right-handed alpha
Helix 69
AH6
B
761 774Right-handed alpha
Helix 70
AH7
B
808 812Right-handed 310
Helix 71
AH8
B
813 854Right-handed alpha
Helix 72
AH9
B
855 857Right-handed 310
Helix 73
AI1
B
860 889Right-handed alpha
Helix 74
AI2
B
889 919Right-handed alpha
Helix 75
AI3
B
923 943Right-handed alpha
Helix 76
AI4
B
952 958Right-handed alpha
Helix 77
AI5
B
966 977Right-handed alpha
Helix 78
AI6
B
1043 1049Right-handed alpha
Helix 79
AI7
B
1069 1080Right-handed alpha
Helix 80
AI8
B
1085 1107Right-handed alpha
Helix 81
AI9
B
1113 1124Right-handed alpha
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There are 8 sheets in PDB entry 8U7R. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
978 982first strand
Strand 2
A
1063 1067anti-parallel
Strand 3
A
999 1003anti-parallel
Strand 4
A
1041 1042anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1032 1036first strand
Strand 2
A
1006 1010anti-parallel
Strand 3
A
1056 1059anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1125 1127first strand
Strand 2
A
1186 1190anti-parallel
Strand 3
A
1142 1147anti-parallel
Strand 4
A
1165 1166anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1135 1137first strand
Strand 2
A
1173 1175anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
978 982first strand
Strand 2
B
1063 1067anti-parallel
Strand 3
B
999 1003anti-parallel
Strand 4
B
1041 1042anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1032 1036first strand
Strand 2
B
1006 1010anti-parallel
Strand 3
B
1056 1059anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1125 1127first strand
Strand 2
B
1186 1190anti-parallel
Strand 3
B
1142 1147anti-parallel
Strand 4
B
1165 1167anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1135 1137first strand
Strand 2
B
1173 1175anti-parallel
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