Analysis of interatomic Contacts of Structural Units in PDB entry:
8U7S


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8U7S entry

There are 2 chains in PDB entry 8U7S (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 76ALA 1192
B
 LYS 76ALA 1192
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 74 helices in PDB entry 8U7S. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
77 94Right-handed alpha
Helix 2
AA2
A
102 120Right-handed alpha
Helix 3
AA3
A
120 128Right-handed alpha
Helix 4
AA4
A
134 151Right-handed alpha
Helix 5
AA5
A
155 162Right-handed alpha
Helix 6
AA6
A
162 189Right-handed alpha
Helix 7
AA7
A
194 207Right-handed alpha
Helix 8
AA8
A
210 221Right-handed alpha
Helix 9
AA9
A
223 253Right-handed alpha
Helix 10
AB1
A
260 291Right-handed alpha
Helix 11
AB2
A
298 319Right-handed alpha
Helix 12
AB3
A
321 337Right-handed alpha
Helix 13
AB4
A
342 375Right-handed alpha
Helix 14
AB5
A
376 380Right-handed 310
Helix 15
AB6
A
381 414Right-handed alpha
Helix 16
AB7
A
418 427Right-handed alpha
Helix 17
AB8
A
432 447Right-handed alpha
Helix 18
AB9
A
449 481Right-handed alpha
Helix 19
AC1
A
487 514Right-handed alpha
Helix 20
AC2
A
522 530Right-handed alpha
Helix 21
AC3
A
572 601Right-handed alpha
Helix 22
AC4
A
604 621Right-handed alpha
Helix 23
AC5
A
627 636Right-handed alpha
Helix 24
AC6
A
637 639Right-handed 310
Helix 25
AC7
A
640 653Right-handed alpha
Helix 26
AC8
A
813 854Right-handed alpha
Helix 27
AC9
A
855 857Right-handed 310
Helix 28
AD1
A
860 889Right-handed alpha
Helix 29
AD2
A
889 919Right-handed alpha
Helix 30
AD3
A
923 943Right-handed alpha
Helix 31
AD4
A
952 959Right-handed alpha
Helix 32
AD5
A
960 964Right-handed 310
Helix 33
AD6
A
966 977Right-handed alpha
Helix 34
AD7
A
1044 1049Right-handed alpha
Helix 35
AD8
A
1070 1080Right-handed alpha
Helix 36
AD9
A
1085 1107Right-handed alpha
Helix 37
AE1
A
1113 1123Right-handed alpha
Helix 38
AE2
B
77 94Right-handed alpha
Helix 39
AE3
B
102 120Right-handed alpha
Helix 40
AE4
B
120 128Right-handed alpha
Helix 41
AE5
B
134 151Right-handed alpha
Helix 42
AE6
B
155 162Right-handed alpha
Helix 43
AE7
B
162 189Right-handed alpha
Helix 44
AE8
B
194 207Right-handed alpha
Helix 45
AE9
B
210 221Right-handed alpha
Helix 46
AF1
B
223 253Right-handed alpha
Helix 47
AF2
B
260 291Right-handed alpha
Helix 48
AF3
B
298 319Right-handed alpha
Helix 49
AF4
B
321 337Right-handed alpha
Helix 50
AF5
B
342 375Right-handed alpha
Helix 51
AF6
B
376 380Right-handed 310
Helix 52
AF7
B
381 414Right-handed alpha
Helix 53
AF8
B
418 427Right-handed alpha
Helix 54
AF9
B
432 447Right-handed alpha
Helix 55
AG1
B
449 481Right-handed alpha
Helix 56
AG2
B
482 485Right-handed 310
Helix 57
AG3
B
487 514Right-handed alpha
Helix 58
AG4
B
522 530Right-handed alpha
Helix 59
AG5
B
572 601Right-handed alpha
Helix 60
AG6
B
604 621Right-handed alpha
Helix 61
AG7
B
627 636Right-handed alpha
Helix 62
AG8
B
637 640Right-handed 310
Helix 63
AG9
B
641 653Right-handed alpha
Helix 64
AH1
B
813 854Right-handed alpha
Helix 65
AH2
B
860 889Right-handed alpha
Helix 66
AH3
B
889 919Right-handed alpha
Helix 67
AH4
B
923 943Right-handed alpha
Helix 68
AH5
B
952 959Right-handed alpha
Helix 69
AH6
B
960 964Right-handed 310
Helix 70
AH7
B
966 977Right-handed alpha
Helix 71
AH8
B
1044 1049Right-handed alpha
Helix 72
AH9
B
1070 1080Right-handed alpha
Helix 73
AI1
B
1085 1107Right-handed alpha
Helix 74
AI2
B
1113 1123Right-handed alpha
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There are 8 sheets in PDB entry 8U7S. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
978 982first strand
Strand 2
A
1063 1069anti-parallel
Strand 3
A
997 1003anti-parallel
Strand 4
A
1041 1042anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1033 1035first strand
Strand 2
A
1006 1009anti-parallel
Strand 3
A
1056 1059anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1125 1127first strand
Strand 2
A
1185 1188anti-parallel
Strand 3
A
1145 1149anti-parallel
Strand 4
A
1165 1166anti-parallel
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There are 2 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1135 1137first strand
Strand 2
A
1173 1175anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
978 982first strand
Strand 2
B
1063 1069anti-parallel
Strand 3
B
997 1003anti-parallel
Strand 4
B
1041 1042anti-parallel
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There are 3 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1033 1035first strand
Strand 2
B
1006 1009anti-parallel
Strand 3
B
1056 1059anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1126 1127first strand
Strand 2
B
1185 1188anti-parallel
Strand 3
B
1145 1149anti-parallel
Strand 4
B
1165 1166anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
1135 1137first strand
Strand 2
B
1173 1175anti-parallel
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