Analysis of interatomic Contacts of Structural Units in PDB entry:
8U7T

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 8U7T entry

There are 7 chains in PDB entry 8U7T (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
F	LYS 1	ALA 459
A	VAL 460	GLN 1032
B	VAL 989	PHE 1537
C	VAL 1544	SER 2095
D	VAL 2102	GLN 2674
G	ALA 2650	ALA 2672
E	VAL 2673	SER 3249

There are158 helices in PDB entry 8U7T. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	AA1	F	1	16	Right-handed alpha
Helix 2	AA2	F	16	24	Right-handed alpha
Helix 3	AA3	F	40	52	Right-handed alpha
Helix 4	AA4	F	62	65	Right-handed 310
Helix 5	AA5	F	68	84	Right-handed alpha
Helix 6	AA6	F	92	97	Right-handed alpha
Helix 7	AA7	F	103	116	Right-handed alpha
Helix 8	AA8	F	154	165	Right-handed alpha
Helix 9	AA9	F	166	168	Right-handed 310
Helix 10	AB1	F	175	183	Right-handed alpha
Helix 11	AB2	F	189	206	Right-handed alpha
Helix 12	AB3	F	210	220	Right-handed alpha
Helix 13	AB4	F	224	239	Right-handed alpha
Helix 14	AB5	F	241	247	Right-handed alpha
Helix 15	AB6	F	257	268	Right-handed alpha
Helix 16	AB7	F	278	282	Right-handed 310
Helix 17	AB8	F	284	299	Right-handed alpha
Helix 18	AB9	F	308	314	Right-handed alpha
Helix 19	AC1	F	321	339	Right-handed alpha
Helix 20	AC2	F	377	388	Right-handed alpha
Helix 21	AC3	F	399	406	Right-handed alpha
Helix 22	AC4	F	410	437	Right-handed alpha
Helix 23	AC5	F	448	456	Right-handed alpha
Helix 24	AC6	F	457	459	Right-handed 310
Helix 25	AC7	A	461	465	Right-handed 310
Helix 26	AC8	A	468	485	Right-handed alpha
Helix 27	AC9	A	486	493	Right-handed alpha
Helix 28	AD1	A	509	521	Right-handed alpha
Helix 29	AD2	A	531	533	Right-handed 310
Helix 30	AD3	A	539	556	Right-handed alpha
Helix 31	AD4	A	565	569	Right-handed 310
Helix 32	AD5	A	578	593	Right-handed alpha
Helix 33	AD6	A	595	599	Right-handed 310
Helix 34	AD7	A	613	618	Right-handed alpha
Helix 35	AD8	A	632	644	Right-handed alpha
Helix 36	AD9	A	668	686	Right-handed alpha
Helix 37	AE1	A	708	718	Right-handed alpha
Helix 38	AE2	A	723	727	Right-handed 310
Helix 39	AE3	A	741	758	Right-handed alpha
Helix 40	AE4	A	758	766	Right-handed alpha
Helix 41	AE5	A	782	794	Right-handed alpha
Helix 42	AE6	A	804	806	Right-handed 310
Helix 43	AE7	A	812	828	Right-handed alpha
Helix 44	AE8	A	851	853	Right-handed 310
Helix 45	AE9	A	854	868	Right-handed alpha
Helix 46	AF1	A	884	888	Right-handed 310
Helix 47	AF2	A	889	894	Right-handed alpha
Helix 48	AF3	A	909	920	Right-handed alpha
Helix 49	AF4	A	931	938	Right-handed alpha
Helix 50	AF5	A	942	974	Right-handed alpha
Helix 51	AF6	A	1003	1011	Right-handed alpha
Helix 52	AF7	A	1012	1014	Right-handed 310
Helix 53	AF8	A	1019	1032	Right-handed alpha
Helix 54	AF9	B	998	1014	Right-handed alpha
Helix 55	AG1	B	1014	1022	Right-handed alpha
Helix 56	AG2	B	1038	1050	Right-handed alpha
Helix 57	AG3	B	1059	1063	Right-handed 310
Helix 58	AG4	B	1068	1085	Right-handed alpha
Helix 59	AG5	B	1093	1097	Right-handed 310
Helix 60	AG6	B	1107	1121	Right-handed alpha
Helix 61	AG7	B	1137	1141	Right-handed 310
Helix 62	AG8	B	1142	1146	Right-handed 310
Helix 63	AG9	B	1161	1173	Right-handed alpha
Helix 64	AH1	B	1183	1191	Right-handed alpha
Helix 65	AH2	B	1196	1214	Right-handed alpha
Helix 66	AH3	B	1220	1224	Right-handed alpha
Helix 67	AH4	B	1229	1240	Right-handed alpha
Helix 68	AH5	B	1242	1247	Right-handed 310
Helix 69	AH6	B	1263	1280	Right-handed alpha
Helix 70	AH7	B	1280	1288	Right-handed alpha
Helix 71	AH8	B	1304	1315	Right-handed alpha
Helix 72	AH9	B	1334	1350	Right-handed alpha
Helix 73	AI1	B	1360	1363	Right-handed 310
Helix 74	AI2	B	1376	1390	Right-handed alpha
Helix 75	AI3	B	1411	1416	Right-handed alpha
Helix 76	AI4	B	1430	1442	Right-handed alpha
Helix 77	AI5	B	1453	1460	Right-handed alpha
Helix 78	AI6	B	1464	1493	Right-handed alpha
Helix 79	AI7	B	1500	1508	Right-handed alpha
Helix 80	AI8	B	1516	1534	Right-handed alpha
Helix 81	AI9	C	1545	1549	Right-handed 310
Helix 82	AJ1	C	1552	1569	Right-handed alpha
Helix 83	AJ2	C	1570	1577	Right-handed alpha
Helix 84	AJ3	C	1593	1605	Right-handed alpha
Helix 85	AJ4	C	1615	1618	Right-handed 310
Helix 86	AJ5	C	1624	1640	Right-handed alpha
Helix 87	AJ6	C	1648	1652	Right-handed 310
Helix 88	AJ7	C	1661	1676	Right-handed alpha
Helix 89	AJ8	C	1697	1701	Right-handed 310
Helix 90	AJ9	C	1716	1728	Right-handed alpha
Helix 91	AK1	C	1739	1746	Right-handed alpha
Helix 92	AK2	C	1751	1773	Right-handed alpha
Helix 93	AK3	C	1781	1786	Right-handed alpha
Helix 94	AK4	C	1791	1802	Right-handed alpha
Helix 95	AK5	C	1804	1808	Right-handed 310
Helix 96	AK6	C	1825	1842	Right-handed alpha
Helix 97	AK7	C	1842	1850	Right-handed alpha
Helix 98	AK8	C	1866	1878	Right-handed alpha
Helix 99	AK9	C	1896	1912	Right-handed alpha
Helix 100	AL1	C	1938	1952	Right-handed alpha
Helix 101	AL2	C	1968	1972	Right-handed 310
Helix 102	AL3	C	1973	1978	Right-handed alpha
Helix 103	AL4	C	1992	2004	Right-handed alpha
Helix 104	AL5	C	2015	2023	Right-handed alpha
Helix 105	AL6	C	2026	2053	Right-handed alpha
Helix 106	AL7	C	2062	2070	Right-handed alpha
Helix 107	AL8	C	2071	2073	Right-handed 310
Helix 108	AL9	C	2078	2095	Right-handed alpha
Helix 109	AM1	D	2110	2127	Right-handed alpha
Helix 110	AM2	D	2128	2135	Right-handed alpha
Helix 111	AM3	D	2151	2163	Right-handed alpha
Helix 112	AM4	D	2182	2198	Right-handed alpha
Helix 113	AM5	D	2207	2210	Right-handed 310
Helix 114	AM6	D	2219	2234	Right-handed alpha
Helix 115	AM7	D	2255	2259	Right-handed 310
Helix 116	AM8	D	2274	2286	Right-handed alpha
Helix 117	AM9	D	2296	2304	Right-handed alpha
Helix 118	AN1	D	2309	2328	Right-handed alpha
Helix 119	AN2	D	2339	2344	Right-handed alpha
Helix 120	AN3	D	2349	2360	Right-handed alpha
Helix 121	AN4	D	2363	2367	Right-handed 310
Helix 122	AN5	D	2376	2380	Right-handed 310
Helix 123	AN6	D	2383	2400	Right-handed alpha
Helix 124	AN7	D	2400	2408	Right-handed alpha
Helix 125	AN8	D	2424	2435	Right-handed alpha
Helix 126	AN9	D	2445	2449	Right-handed 310
Helix 127	AO1	D	2455	2470	Right-handed alpha
Helix 128	AO2	D	2492	2510	Right-handed alpha
Helix 129	AO3	D	2526	2530	Right-handed 310
Helix 130	AO4	D	2550	2562	Right-handed alpha
Helix 131	AO5	D	2572	2579	Right-handed alpha
Helix 132	AO6	D	2584	2607	Right-handed alpha
Helix 133	AO7	D	2645	2655	Right-handed alpha
Helix 134	AO8	D	2661	2674	Right-handed alpha
Helix 135	AO9	E	2674	2678	Right-handed 310
Helix 136	AP1	E	2681	2698	Right-handed alpha
Helix 137	AP2	E	2699	2706	Right-handed alpha
Helix 138	AP3	E	2722	2734	Right-handed alpha
Helix 139	AP4	E	2742	2747	Right-handed alpha
Helix 140	AP5	E	2753	2769	Right-handed alpha
Helix 141	AP6	E	2778	2782	Right-handed 310
Helix 142	AP7	E	2790	2805	Right-handed alpha
Helix 143	AP8	E	2846	2857	Right-handed alpha
Helix 144	AP9	E	2867	2875	Right-handed alpha
Helix 145	AQ1	E	2880	2898	Right-handed alpha
Helix 146	AQ2	E	2920	2930	Right-handed alpha
Helix 147	AQ3	E	2954	2971	Right-handed alpha
Helix 148	AQ4	E	2971	2979	Right-handed alpha
Helix 149	AQ5	E	2995	3006	Right-handed alpha
Helix 150	AQ6	E	3025	3041	Right-handed alpha
Helix 151	AQ7	E	3050	3055	Right-handed alpha
Helix 152	AQ8	E	3063	3081	Right-handed alpha
Helix 153	AQ9	E	3097	3101	Right-handed 310
Helix 154	AR1	E	3122	3133	Right-handed alpha
Helix 155	AR2	E	3143	3150	Right-handed alpha
Helix 156	AR3	E	3155	3175	Right-handed alpha
Helix 157	AR4	E	3216	3226	Right-handed alpha
Helix 158	AR5	E	3233	3249	Right-handed alpha

There are 12 sheets in PDB entry 8U7T. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1, AB2, AB3,

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	56	60	first strand
Strand 2	F	87	91	parallel
Strand 3	F	124	128	parallel
Strand 4	F	30	34	parallel
Strand 5	F	147	150	parallel

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There are 5 strands in AA2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	F	274	276	first strand
Strand 2	F	302	307	parallel
Strand 3	F	347	353	parallel
Strand 4	F	250	253	parallel
Strand 5	F	373	374	parallel

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There are 5 strands in AA3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	525	529	first strand
Strand 2	A	559	563	parallel
Strand 3	A	601	605	parallel
Strand 4	A	500	503	parallel
Strand 5	A	624	627	parallel

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There are 5 strands in AA4 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	799	802	first strand
Strand 2	A	831	836	parallel
Strand 3	A	876	882	parallel
Strand 4	A	772	776	parallel
Strand 5	A	901	903	parallel

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There are 5 strands in AA5 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1053	1057	first strand
Strand 2	B	1087	1091	parallel
Strand 3	B	1129	1134	parallel
Strand 4	B	1028	1032	parallel
Strand 5	B	1153	1156	parallel

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There are 5 strands in AA6 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	1319	1323	first strand
Strand 2	B	1353	1358	parallel
Strand 3	B	1398	1403	parallel
Strand 4	B	1295	1298	parallel
Strand 5	B	1422	1425	parallel

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There are 5 strands in AA7 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1608	1613	first strand
Strand 2	C	1642	1647	parallel
Strand 3	C	1685	1690	parallel
Strand 4	C	1583	1587	parallel
Strand 5	C	1708	1711	parallel

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There are 5 strands in AA8 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	1881	1885	first strand
Strand 2	C	1915	1920	parallel
Strand 3	C	1960	1966	parallel
Strand 4	C	1857	1860	parallel
Strand 5	C	1984	1987	parallel

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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	2142	2144	first strand
Strand 2	D	2242	2247	parallel
Strand 3	D	2200	2205	parallel
Strand 4	D	2166	2171	parallel

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There are 5 strands in AB1 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	2439	2443	first strand
Strand 2	D	2473	2478	parallel
Strand 3	D	2518	2524	parallel
Strand 4	D	2415	2418	parallel
Strand 5	D	2542	2545	parallel

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There are 5 strands in AB2 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	2738	2741	first strand
Strand 2	E	2772	2776	parallel
Strand 3	E	2814	2819	parallel
Strand 4	E	2713	2716	parallel
Strand 5	E	2837	2840	parallel

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There are 5 strands in AB3 sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	E	3010	3014	first strand
Strand 2	E	3044	3049	parallel
Strand 3	E	3090	3095	parallel
Strand 4	E	2986	2989	parallel
Strand 5	E	3113	3116	parallel

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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 8U7T

Analysis of interatomic Contacts of Structural Units in PDB entry:
8U7T