Analysis of interatomic Contacts of Structural Units in PDB entry:
8U86


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8U86 entry

There are 2 chains in PDB entry 8U86 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 182PHE 719
C
 THR 182PHE 719
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 8U86. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
183 189Right-handed alpha
Helix 2
AA2
A
191 213Right-handed alpha
Helix 3
AA3
A
220 242Right-handed alpha
Helix 4
AA4
A
245 251Right-handed alpha
Helix 5
AA5
A
253 259Right-handed alpha
Helix 6
AA6
A
263 294Right-handed alpha
Helix 7
AA7
A
320 338Right-handed alpha
Helix 8
AA8
A
340 346Right-handed alpha
Helix 9
AA9
A
348 357Right-handed alpha
Helix 10
AB1
A
358 368Right-handed alpha
Helix 11
AB2
A
372 391Right-handed alpha
Helix 12
AB3
A
468 478Right-handed alpha
Helix 13
AB4
A
529 534Right-handed alpha
Helix 14
AB5
A
547 563Right-handed alpha
Helix 15
AB6
A
600 616Right-handed alpha
Helix 16
AB7
A
673 684Right-handed alpha
Helix 17
AB8
A
696 709Right-handed alpha
Helix 18
AB9
C
183 189Right-handed alpha
Helix 19
AC1
C
191 213Right-handed alpha
Helix 20
AC2
C
220 242Right-handed alpha
Helix 21
AC3
C
245 251Right-handed alpha
Helix 22
AC4
C
253 259Right-handed alpha
Helix 23
AC5
C
263 294Right-handed alpha
Helix 24
AC6
C
320 338Right-handed alpha
Helix 25
AC7
C
340 346Right-handed alpha
Helix 26
AC8
C
348 357Right-handed alpha
Helix 27
AC9
C
358 368Right-handed alpha
Helix 28
AD1
C
372 391Right-handed alpha
Helix 29
AD2
C
468 478Right-handed alpha
Helix 30
AD3
C
529 534Right-handed alpha
Helix 31
AD4
C
547 563Right-handed alpha
Helix 32
AD5
C
600 616Right-handed alpha
Helix 33
AD6
C
673 684Right-handed alpha
Helix 34
AD7
C
696 709Right-handed alpha
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There are 10 sheets in PDB entry 8U86. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8, AA9, AB1,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
397 398first strand
Strand 2
A
521 522anti-parallel
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There are 3 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
402 408first strand
Strand 2
A
412 418anti-parallel
Strand 3
A
457 463anti-parallel
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There are 2 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
430 433first strand
Strand 2
A
444 447anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
624 629first strand
Strand 2
A
588 593parallel
Strand 3
A
538 543parallel
Strand 4
A
690 694parallel
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There are 2 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
565 567first strand
Strand 2
A
574 576anti-parallel
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There are 2 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
397 398first strand
Strand 2
C
521 522anti-parallel
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There are 3 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
402 408first strand
Strand 2
C
412 418anti-parallel
Strand 3
C
457 463anti-parallel
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There are 2 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
430 433first strand
Strand 2
C
444 447anti-parallel
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There are 4 strands in AA9 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
624 629first strand
Strand 2
C
588 593parallel
Strand 3
C
538 543parallel
Strand 4
C
690 694parallel
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There are 2 strands in AB1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
565 567first strand
Strand 2
C
574 576anti-parallel
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