Analysis of interatomic Contacts of Structural Units in PDB entry:
8U92


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8U92 entry

There are 9 chains in PDB entry 8U92 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS -1LEU 164
A
 GLN 166GLY 297
B
 HIS -1LEU 164
B
 GLN 166GLY 297
C
 HIS -1LEU 164
C
 GLN 166GLY 297
D
 HIS -1LEU 164
D
 GLN 166GLY 297
E
 HIS -1ALA 92
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 96 helices in PDB entry 8U92. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
-1 6Right-handed 310
Helix 2
AA2
A
23 37Right-handed alpha
Helix 3
AA3
A
50 54Right-handed 310
Helix 4
AA4
A
55 71Right-handed alpha
Helix 5
AA5
A
84 99Right-handed alpha
Helix 6
AA6
A
114 130Right-handed alpha
Helix 7
AA7
A
139 144Right-handed alpha
Helix 8
AA8
A
148 157Right-handed alpha
Helix 9
AA9
A
170 181Right-handed alpha
Helix 10
AB1
A
190 192Right-handed 310
Helix 11
AB2
A
193 200Right-handed alpha
Helix 12
AB3
A
209 227Right-handed alpha
Helix 13
AB4
A
228 250Right-handed alpha
Helix 14
AB5
A
250 262Right-handed alpha
Helix 15
AB6
A
278 280Right-handed 310
Helix 16
AB7
A
281 297Right-handed alpha
Helix 17
AB8
B
-1 6Right-handed 310
Helix 18
AB9
B
23 37Right-handed alpha
Helix 19
AC1
B
50 54Right-handed 310
Helix 20
AC2
B
55 71Right-handed alpha
Helix 21
AC3
B
84 98Right-handed alpha
Helix 22
AC4
B
114 130Right-handed alpha
Helix 23
AC5
B
139 144Right-handed alpha
Helix 24
AC6
B
148 157Right-handed alpha
Helix 25
AC7
B
170 181Right-handed alpha
Helix 26
AC8
B
190 192Right-handed 310
Helix 27
AC9
B
193 201Right-handed alpha
Helix 28
AD1
B
209 226Right-handed alpha
Helix 29
AD2
B
228 250Right-handed alpha
Helix 30
AD3
B
250 262Right-handed alpha
Helix 31
AD4
B
278 280Right-handed 310
Helix 32
AD5
B
281 297Right-handed alpha
Helix 33
AD6
C
-1 6Right-handed 310
Helix 34
AD7
C
23 37Right-handed alpha
Helix 35
AD8
C
50 54Right-handed 310
Helix 36
AD9
C
55 71Right-handed alpha
Helix 37
AE1
C
84 99Right-handed alpha
Helix 38
AE2
C
114 130Right-handed alpha
Helix 39
AE3
C
139 144Right-handed alpha
Helix 40
AE4
C
148 156Right-handed alpha
Helix 41
AE5
C
170 181Right-handed alpha
Helix 42
AE6
C
190 192Right-handed 310
Helix 43
AE7
C
193 201Right-handed alpha
Helix 44
AE8
C
209 227Right-handed alpha
Helix 45
AE9
C
228 250Right-handed alpha
Helix 46
AF1
C
250 262Right-handed alpha
Helix 47
AF2
C
278 280Right-handed 310
Helix 48
AF3
C
281 297Right-handed alpha
Helix 49
AF4
D
-1 6Right-handed 310
Helix 50
AF5
D
23 37Right-handed alpha
Helix 51
AF6
D
50 54Right-handed 310
Helix 52
AF7
D
55 71Right-handed alpha
Helix 53
AF8
D
84 98Right-handed alpha
Helix 54
AF9
D
114 130Right-handed alpha
Helix 55
AG1
D
139 144Right-handed alpha
Helix 56
AG2
D
148 157Right-handed alpha
Helix 57
AG3
D
170 181Right-handed alpha
Helix 58
AG4
D
190 192Right-handed 310
Helix 59
AG5
D
193 200Right-handed alpha
Helix 60
AG6
D
209 226Right-handed alpha
Helix 61
AG7
D
228 250Right-handed alpha
Helix 62
AG8
D
250 262Right-handed alpha
Helix 63
AG9
D
278 280Right-handed 310
Helix 64
AH1
D
281 297Right-handed alpha
Helix 65
AH2
E
2 6Right-handed 310
Helix 66
AH3
E
23 37Right-handed alpha
Helix 67
AH4
E
50 54Right-handed 310
Helix 68
AH5
E
55 71Right-handed alpha
Helix 69
AH6
E
84 99Right-handed alpha
Helix 70
AH7
E
114 130Right-handed alpha
Helix 71
AH8
E
139 144Right-handed alpha
Helix 72
AH9
E
148 157Right-handed alpha
Helix 73
AI1
E
170 181Right-handed alpha
Helix 74
AI2
E
190 192Right-handed 310
Helix 75
AI3
E
193 200Right-handed alpha
Helix 76
AI4
E
209 227Right-handed alpha
Helix 77
AI5
E
228 250Right-handed alpha
Helix 78
AI6
E
250 262Right-handed alpha
Helix 79
AI7
E
278 280Right-handed 310
Helix 80
AI8
E
281 296Right-handed alpha
Helix 81
AI9
F
-1 6Right-handed 310
Helix 82
AJ1
F
23 37Right-handed alpha
Helix 83
AJ2
F
50 54Right-handed 310
Helix 84
AJ3
F
55 71Right-handed alpha
Helix 85
AJ4
F
84 99Right-handed alpha
Helix 86
AJ5
F
114 129Right-handed alpha
Helix 87
AJ6
F
139 144Right-handed alpha
Helix 88
AJ7
F
148 157Right-handed alpha
Helix 89
AJ8
F
170 181Right-handed alpha
Helix 90
AJ9
F
190 192Right-handed 310
Helix 91
AK1
F
193 200Right-handed alpha
Helix 92
AK2
F
209 227Right-handed alpha
Helix 93
AK3
F
228 250Right-handed alpha
Helix 94
AK4
F
250 262Right-handed alpha
Helix 95
AK5
F
278 280Right-handed 310
Helix 96
AK6
F
281 296Right-handed alpha
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There are 6 sheets in PDB entry 8U92. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6,

There are 8 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
8 10first strand
Strand 2
A
204 207parallel
Strand 3
A
185 188parallel
Strand 4
A
161 166parallel
Strand 5
A
134 138parallel
Strand 6
A
102 106parallel
Strand 7
A
75 79parallel
Strand 8
A
41 44parallel
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There are 8 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
8 10first strand
Strand 2
B
204 207parallel
Strand 3
B
185 188parallel
Strand 4
B
161 166parallel
Strand 5
B
134 138parallel
Strand 6
B
102 106parallel
Strand 7
B
75 79parallel
Strand 8
B
41 44parallel
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There are 8 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
8 10first strand
Strand 2
C
204 207parallel
Strand 3
C
185 188parallel
Strand 4
C
161 166parallel
Strand 5
C
134 138parallel
Strand 6
C
102 106parallel
Strand 7
C
75 79parallel
Strand 8
C
41 44parallel
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There are 8 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
8 10first strand
Strand 2
D
204 207parallel
Strand 3
D
185 188parallel
Strand 4
D
161 166parallel
Strand 5
D
134 138parallel
Strand 6
D
102 106parallel
Strand 7
D
75 79parallel
Strand 8
D
41 44parallel
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There are 8 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
8 10first strand
Strand 2
E
204 207parallel
Strand 3
E
185 188parallel
Strand 4
E
161 166parallel
Strand 5
E
134 138parallel
Strand 6
E
102 106parallel
Strand 7
E
75 79parallel
Strand 8
E
41 44parallel
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There are 8 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
8 10first strand
Strand 2
F
204 207parallel
Strand 3
F
185 188parallel
Strand 4
F
161 166parallel
Strand 5
F
134 138parallel
Strand 6
F
102 106parallel
Strand 7
F
75 79parallel
Strand 8
F
41 44parallel
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