Analysis of interatomic Contacts of Structural Units in PDB entry:
8U9O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8U9O entry

There are 2 chains in PDB entry 8U9O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 177ASN 188
B
 PRO 189LYS 343
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 8 helices in PDB entry 8U9O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
208 216Right-handed alpha
Helix 2
AA2
B
220 222Right-handed 310
Helix 3
AA3
B
223 240Right-handed alpha
Helix 4
AA4
B
259 285Right-handed alpha
Helix 5
AA5
B
297 307Right-handed alpha
Helix 6
AA6
B
310 324Right-handed alpha
Helix 7
AA7
B
328 335Right-handed alpha
Helix 8
AA8
B
336 342Right-handed alpha
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There is 1 sheet (AA1) in PDB entry 8U9O.

There are 5 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
201 206first strand
Strand 2
B
190 195anti-parallel
Strand 3
A
181 186anti-parallel
Strand 4
B
247 255anti-parallel
Strand 5
B
289 296parallel
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