Analysis of interatomic Contacts of Structural Units in PDB entry:
8UAH


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8UAH entry

There are 2 chains in PDB entry 8UAH (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 GLN 360THR 693
C
 HIS 16ASP 132
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 8UAH. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
B
379 384Right-handed alpha
Helix 2
AA2
B
400 404Right-handed 310
Helix 3
AA3
B
426 434Right-handed alpha
Helix 4
AA4
B
452 457Right-handed alpha
Helix 5
AA5
B
478 488Right-handed alpha
Helix 6
AA6
B
504 509Right-handed alpha
Helix 7
AA7
B
529 534Right-handed alpha
Helix 8
AA8
B
555 563Right-handed alpha
Helix 9
AA9
B
580 591Right-handed alpha
Helix 10
AB1
B
607 615Right-handed alpha
Helix 11
AB2
B
633 642Right-handed alpha
Helix 12
AB3
B
659 664Right-handed alpha
Helix 13
AB4
B
681 688Right-handed 310
Helix 14
AB5
C
20 30Right-handed alpha
Helix 15
AB6
C
49 56Right-handed alpha
Helix 16
AB7
C
56 65Right-handed alpha
Helix 17
AB8
C
80 85Right-handed alpha
Helix 18
AB9
C
87 94Right-handed alpha
Helix 19
AC1
C
103 114Right-handed alpha
Helix 20
AC2
C
124 132Right-handed alpha
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There are 3 sheets in PDB entry 8UAH. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 3 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
416 419first strand
Strand 2
B
442 445parallel
Strand 3
B
468 471parallel
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There are 7 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
520 522first strand
Strand 2
B
544 546parallel
Strand 3
B
570 571parallel
Strand 4
B
596 597parallel
Strand 5
B
621 622parallel
Strand 6
B
647 649parallel
Strand 7
B
672 674parallel
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There are 3 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
43 47first strand
Strand 2
C
36 40anti-parallel
Strand 3
C
71 74parallel
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