Analysis of interatomic Contacts of Structural Units in PDB entry:
8UC1


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8UC1 entry

There are 2 chains in PDB entry 8UC1 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 14GLN 722
B
 GLN 14GLN 722
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 66 helices in PDB entry 8UC1. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
A
24 32Right-handed alpha
Helix 2
AA2
A
41 51Right-handed alpha
Helix 3
AA3
A
53 65Right-handed alpha
Helix 4
AA4
A
66 71Right-handed alpha
Helix 5
AA5
A
72 74Right-handed 310
Helix 6
AA6
A
78 105Right-handed alpha
Helix 7
AA7
A
109 116Right-handed alpha
Helix 8
AA8
A
117 127Right-handed alpha
Helix 9
AA9
A
137 152Right-handed alpha
Helix 10
AB1
A
168 196Right-handed alpha
Helix 11
AB2
A
198 205Right-handed 310
Helix 12
AB3
A
206 231Right-handed alpha
Helix 13
AB4
A
241 253Right-handed alpha
Helix 14
AB5
A
254 257Right-handed 310
Helix 15
AB6
A
258 282Right-handed alpha
Helix 16
AB7
A
291 308Right-handed alpha
Helix 17
AB8
A
308 314Right-handed alpha
Helix 18
AB9
A
335 366Right-handed alpha
Helix 19
AC1
A
370 387Right-handed alpha
Helix 20
AC2
A
397 407Right-handed alpha
Helix 21
AC3
A
411 427Right-handed alpha
Helix 22
AC4
A
430 435Right-handed 310
Helix 23
AC5
A
436 448Right-handed alpha
Helix 24
AC6
A
448 453Right-handed alpha
Helix 25
AC7
A
456 465Right-handed alpha
Helix 26
AC8
A
465 482Right-handed alpha
Helix 27
AC9
A
484 505Right-handed alpha
Helix 28
AD1
A
549 560Right-handed alpha
Helix 29
AD2
A
563 577Right-handed alpha
Helix 30
AD3
A
653 671Right-handed alpha
Helix 31
AD4
A
680 690Right-handed alpha
Helix 32
AD5
A
695 700Right-handed 310
Helix 33
AD6
A
705 722Right-handed alpha
Helix 34
AD7
B
24 32Right-handed alpha
Helix 35
AD8
B
41 51Right-handed alpha
Helix 36
AD9
B
53 65Right-handed alpha
Helix 37
AE1
B
66 71Right-handed alpha
Helix 38
AE2
B
72 74Right-handed 310
Helix 39
AE3
B
78 105Right-handed alpha
Helix 40
AE4
B
109 116Right-handed alpha
Helix 41
AE5
B
117 127Right-handed alpha
Helix 42
AE6
B
137 152Right-handed alpha
Helix 43
AE7
B
168 196Right-handed alpha
Helix 44
AE8
B
198 205Right-handed 310
Helix 45
AE9
B
206 231Right-handed alpha
Helix 46
AF1
B
241 253Right-handed alpha
Helix 47
AF2
B
254 257Right-handed 310
Helix 48
AF3
B
258 282Right-handed alpha
Helix 49
AF4
B
291 308Right-handed alpha
Helix 50
AF5
B
308 314Right-handed alpha
Helix 51
AF6
B
335 366Right-handed alpha
Helix 52
AF7
B
370 387Right-handed alpha
Helix 53
AF8
B
397 407Right-handed alpha
Helix 54
AF9
B
411 427Right-handed alpha
Helix 55
AG1
B
430 435Right-handed 310
Helix 56
AG2
B
436 448Right-handed alpha
Helix 57
AG3
B
448 453Right-handed alpha
Helix 58
AG4
B
456 465Right-handed alpha
Helix 59
AG5
B
465 482Right-handed alpha
Helix 60
AG6
B
484 505Right-handed alpha
Helix 61
AG7
B
549 560Right-handed alpha
Helix 62
AG8
B
563 577Right-handed alpha
Helix 63
AG9
B
653 671Right-handed alpha
Helix 64
AH1
B
680 690Right-handed alpha
Helix 65
AH2
B
695 700Right-handed 310
Helix 66
AH3
B
705 722Right-handed alpha
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There are 3 sheets in PDB entry 8UC1. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3,

There are 2 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
15 21first strand
Strand 2
B
15 21anti-parallel
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There are 6 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
520 522first strand
Strand 2
A
508 513anti-parallel
Strand 3
A
535 540anti-parallel
Strand 4
A
641 645parallel
Strand 5
A
673 677parallel
Strand 6
A
702 703parallel
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There are 6 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
520 522first strand
Strand 2
B
508 513anti-parallel
Strand 3
B
535 540anti-parallel
Strand 4
B
641 645parallel
Strand 5
B
673 677parallel
Strand 6
B
702 703parallel
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