Analysis of interatomic Contacts of Structural Units in PDB entry:
8UC7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 8UC7 entry

There are 4 chains in PDB entry 8UC7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
D
 MET 94VAL 586
A
 MET 94VAL 586
B
 MET 94VAL 586
C
 MET 94VAL 586
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are100 helices in PDB entry 8UC7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
AA1
D
94 99Right-handed alpha
Helix 2
AA2
D
100 103Right-handed 310
Helix 3
AA3
D
107 115Right-handed alpha
Helix 4
AA4
D
116 129Right-handed alpha
Helix 5
AA5
D
139 167Right-handed alpha
Helix 6
AA6
D
172 196Right-handed alpha
Helix 7
AA7
D
209 221Right-handed alpha
Helix 8
AA8
D
221 230Right-handed alpha
Helix 9
AA9
D
231 241Right-handed alpha
Helix 10
AB1
D
253 265Right-handed alpha
Helix 11
AB2
D
266 268Right-handed 310
Helix 12
AB3
D
269 290Right-handed alpha
Helix 13
AB4
D
292 323Right-handed alpha
Helix 14
AB5
D
329 334Right-handed alpha
Helix 15
AB6
D
340 357Right-handed alpha
Helix 16
AB7
D
368 401Right-handed alpha
Helix 17
AB8
D
401 422Right-handed alpha
Helix 18
AB9
D
424 440Right-handed alpha
Helix 19
AC1
D
445 453Right-handed alpha
Helix 20
AC2
D
454 471Right-handed alpha
Helix 21
AC3
D
473 479Right-handed alpha
Helix 22
AC4
D
480 489Right-handed alpha
Helix 23
AC5
D
539 543Right-handed 310
Helix 24
AC6
D
566 574Right-handed alpha
Helix 25
AC7
D
576 586Right-handed alpha
Helix 26
AC8
A
95 99Right-handed alpha
Helix 27
AC9
A
100 103Right-handed 310
Helix 28
AD1
A
107 115Right-handed alpha
Helix 29
AD2
A
116 129Right-handed alpha
Helix 30
AD3
A
139 167Right-handed alpha
Helix 31
AD4
A
172 196Right-handed alpha
Helix 32
AD5
A
209 221Right-handed alpha
Helix 33
AD6
A
221 230Right-handed alpha
Helix 34
AD7
A
231 241Right-handed alpha
Helix 35
AD8
A
253 265Right-handed alpha
Helix 36
AD9
A
266 268Right-handed 310
Helix 37
AE1
A
269 290Right-handed alpha
Helix 38
AE2
A
292 323Right-handed alpha
Helix 39
AE3
A
329 334Right-handed alpha
Helix 40
AE4
A
340 357Right-handed alpha
Helix 41
AE5
A
368 401Right-handed alpha
Helix 42
AE6
A
401 422Right-handed alpha
Helix 43
AE7
A
424 440Right-handed alpha
Helix 44
AE8
A
445 453Right-handed alpha
Helix 45
AE9
A
454 471Right-handed alpha
Helix 46
AF1
A
473 479Right-handed alpha
Helix 47
AF2
A
480 489Right-handed alpha
Helix 48
AF3
A
539 543Right-handed 310
Helix 49
AF4
A
566 574Right-handed alpha
Helix 50
AF5
A
576 586Right-handed alpha
Helix 51
AF6
B
95 99Right-handed alpha
Helix 52
AF7
B
100 103Right-handed 310
Helix 53
AF8
B
107 115Right-handed alpha
Helix 54
AF9
B
116 129Right-handed alpha
Helix 55
AG1
B
139 167Right-handed alpha
Helix 56
AG2
B
172 196Right-handed alpha
Helix 57
AG3
B
209 221Right-handed alpha
Helix 58
AG4
B
221 230Right-handed alpha
Helix 59
AG5
B
231 241Right-handed alpha
Helix 60
AG6
B
253 265Right-handed alpha
Helix 61
AG7
B
266 268Right-handed 310
Helix 62
AG8
B
269 290Right-handed alpha
Helix 63
AG9
B
292 323Right-handed alpha
Helix 64
AH1
B
329 334Right-handed alpha
Helix 65
AH2
B
340 357Right-handed alpha
Helix 66
AH3
B
368 401Right-handed alpha
Helix 67
AH4
B
401 422Right-handed alpha
Helix 68
AH5
B
424 440Right-handed alpha
Helix 69
AH6
B
445 453Right-handed alpha
Helix 70
AH7
B
454 471Right-handed alpha
Helix 71
AH8
B
473 479Right-handed alpha
Helix 72
AH9
B
480 489Right-handed alpha
Helix 73
AI1
B
539 543Right-handed 310
Helix 74
AI2
B
566 574Right-handed alpha
Helix 75
AI3
B
576 586Right-handed alpha
Helix 76
AI4
C
95 99Right-handed alpha
Helix 77
AI5
C
100 103Right-handed 310
Helix 78
AI6
C
107 115Right-handed alpha
Helix 79
AI7
C
116 129Right-handed alpha
Helix 80
AI8
C
139 167Right-handed alpha
Helix 81
AI9
C
172 196Right-handed alpha
Helix 82
AJ1
C
209 221Right-handed alpha
Helix 83
AJ2
C
221 230Right-handed alpha
Helix 84
AJ3
C
231 241Right-handed alpha
Helix 85
AJ4
C
253 265Right-handed alpha
Helix 86
AJ5
C
266 268Right-handed 310
Helix 87
AJ6
C
269 290Right-handed alpha
Helix 88
AJ7
C
292 323Right-handed alpha
Helix 89
AJ8
C
329 334Right-handed alpha
Helix 90
AJ9
C
340 357Right-handed alpha
Helix 91
AK1
C
368 401Right-handed alpha
Helix 92
AK2
C
401 422Right-handed alpha
Helix 93
AK3
C
424 440Right-handed alpha
Helix 94
AK4
C
445 453Right-handed alpha
Helix 95
AK5
C
454 471Right-handed alpha
Helix 96
AK6
C
473 479Right-handed alpha
Helix 97
AK7
C
480 489Right-handed alpha
Helix 98
AK8
C
539 543Right-handed 310
Helix 99
AK9
C
566 574Right-handed alpha
Helix 100
AL1
C
576 586Right-handed alpha
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There are 8 sheets in PDB entry 8UC7. Click on sheet of interest to get list of strands forming it: AA1, AA2, AA3, AA4, AA5, AA6, AA7, AA8,

There are 4 strands in AA1 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
492 496first strand
Strand 2
D
559 565anti-parallel
Strand 3
D
511 517anti-parallel
Strand 4
D
537 538anti-parallel
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There are 4 strands in AA2 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
501 503first strand
Strand 2
D
553 555anti-parallel
Strand 3
D
520 522anti-parallel
Strand 4
D
530 532anti-parallel
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There are 4 strands in AA3 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
492 496first strand
Strand 2
A
559 565anti-parallel
Strand 3
A
511 517anti-parallel
Strand 4
A
537 538anti-parallel
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There are 4 strands in AA4 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
501 503first strand
Strand 2
A
553 555anti-parallel
Strand 3
A
520 522anti-parallel
Strand 4
A
530 532anti-parallel
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There are 4 strands in AA5 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
492 496first strand
Strand 2
B
559 565anti-parallel
Strand 3
B
511 517anti-parallel
Strand 4
B
537 538anti-parallel
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There are 4 strands in AA6 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
501 503first strand
Strand 2
B
553 555anti-parallel
Strand 3
B
520 522anti-parallel
Strand 4
B
530 532anti-parallel
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There are 4 strands in AA7 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
492 496first strand
Strand 2
C
559 565anti-parallel
Strand 3
C
511 517anti-parallel
Strand 4
C
537 538anti-parallel
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There are 4 strands in AA8 sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
501 503first strand
Strand 2
C
553 555anti-parallel
Strand 3
C
520 522anti-parallel
Strand 4
C
530 532anti-parallel
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